RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 AKNAD1Q5T1N1 836 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 APOBEC3HQ6NTF7 200 aaKnown RBP15.72■□□□□ 0.11
CHFR-221ENST00000542714 TEX11Q8IYF3 940 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 NCOA7Q8NI08 942 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 STAG1Q8WVM7 1258 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 TEKT1Q969V4 418 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 MRIQ9BWK5 157 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 LRRC2Q9BYS8 371 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 SIPA1L1O43166 1804 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 MINDY4BA8MYZ0 360 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 USP17L8P0C7I0 530 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 DDIT3P35638 169 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 USP5P45974 858 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 CXCL9Q07325 125 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 Q6ZUG5 572 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 CYB5R4Q7L1T6 521 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 CHST3Q7LGC8 479 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 TGFBRAP1Q8WUH2 860 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 SYT17Q9BSW7 474 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 TPCN1Q9ULQ1 816 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 LIMCH1Q9UPQ0 1083 aa15.71■□□□□ 0.11
CHFR-221ENST00000542714 FLT1P17948 1338 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 MYO3BQ8WXR4 1341 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 B4E1Z4 1266 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 FGRP09769 529 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 CDC42EP5Q6NZY7 148 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 MAPKAPK5Q8IW41 473 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
CHFR-221ENST00000542714 SERPINA10Q9UK55 444 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 ROBO3Q96MS0 1386 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 MYH8P13535 1937 aa15.7■□□□□ 0.1
CHFR-221ENST00000542714 PRC1O43663 620 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 WDHD1O75717 1129 aaPredicted RBP15.69■□□□□ 0.1
CHFR-221ENST00000542714 MCM5P33992 734 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 ANKRD1Q15327 319 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 C12orf60Q5U649 245 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 MFSD6Q6ZSS7 791 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 RALYLQ86SE5 291 aaKnown RBP15.69■□□□□ 0.1
CHFR-221ENST00000542714 FBXL16Q8N461 479 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 SLKQ9H2G2 1235 aaPredicted RBP15.69■□□□□ 0.1
CHFR-221ENST00000542714 GPHNQ9NQX3 736 aaPredicted RBP15.69■□□□□ 0.1
CHFR-221ENST00000542714 USP40Q9NVE5 1235 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 MCM9Q9NXL9 1143 aa15.69■□□□□ 0.1
CHFR-221ENST00000542714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHFR-221ENST00000542714 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
CHFR-221ENST00000542714 TRDNQ13061 729 aa15.68■□□□□ 0.1
CHFR-221ENST00000542714 ME3Q16798 604 aa15.68■□□□□ 0.1
CHFR-221ENST00000542714 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
CHFR-221ENST00000542714 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
CHFR-221ENST00000542714 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
CHFR-221ENST00000542714 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
CHFR-221ENST00000542714 RNF41Q9H4P4 317 aaPredicted RBP15.68■□□□□ 0.1
CHFR-221ENST00000542714 CNNM2Q9H8M5 875 aa15.68■□□□□ 0.1
CHFR-221ENST00000542714 DDX4Q9NQI0 724 aaKnown RBP15.68■□□□□ 0.1
CHFR-221ENST00000542714 SAP30BPQ9UHR5 308 aaKnown RBP15.68■□□□□ 0.1
CHFR-221ENST00000542714 SLC4A8Q2Y0W8 1093 aa15.67■□□□□ 0.1
CHFR-221ENST00000542714 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
CHFR-221ENST00000542714 AGBL3Q8NEM8 1001 aa15.67■□□□□ 0.1
CHFR-221ENST00000542714 BRF1Q92994 677 aa15.67■□□□□ 0.1
CHFR-221ENST00000542714 KRT23Q9C075 422 aa15.67■□□□□ 0.1
CHFR-221ENST00000542714 FZD9O00144 591 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 SH2B2O14492 632 aaPredicted RBP15.66■□□□□ 0.1
CHFR-221ENST00000542714 ORC4O43929 436 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 KDM4AO75164 1064 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHFR-221ENST00000542714 PLCD1P51178 756 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 APOBRQ0VD83 1088 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 RRP12Q5JTH9 1297 aaKnown RBP15.66■□□□□ 0.1
CHFR-221ENST00000542714 DYNLL2Q96FJ2 89 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
CHFR-221ENST00000542714 ZSWIM5Q9P217 1185 aa15.66■□□□□ 0.1
CHFR-221ENST00000542714 HSP90AA1P07900 732 aaKnown RBP15.65■□□□□ 0.1
CHFR-221ENST00000542714 PCP11498 1178 aaKnown RBP15.65■□□□□ 0.1
CHFR-221ENST00000542714 RBM5P52756 815 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHFR-221ENST00000542714 EVCP57679 992 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 NFIAQ12857 509 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 PICALMQ13492 652 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 ARHGAP27Q6ZUM4 889 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 INTS4Q96HW7 963 aaKnown RBP15.65■□□□□ 0.1
CHFR-221ENST00000542714 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
CHFR-221ENST00000542714 SENP2Q9HC62 589 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 ZNF541Q9H0D2 1346 aa15.65■□□□□ 0.1
CHFR-221ENST00000542714 SHTN1A0MZ66 631 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 PRDM1O75626 825 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 POLR3DP05423 398 aaPredicted RBP15.64■□□□□ 0.09
CHFR-221ENST00000542714 FGD1P98174 961 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 TNIP1Q15025 636 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 CCDC83Q8IWF9 413 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
CHFR-221ENST00000542714 TMEM87BQ96K49 555 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 IDI2Q9BXS1 227 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 OSBPL5Q9H0X9 879 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms