RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 ALDH8A1Q9H2A2 487 aaPredicted RBP8.17□□□□□ -1.1
CDH19-203ENST00000540086 GPHNQ9NQX3 736 aaPredicted RBP8.17□□□□□ -1.1
CDH19-203ENST00000540086 ATP8A2Q9NTI2 1148 aa8.17□□□□□ -1.1
CDH19-203ENST00000540086 MCM9Q9NXL9 1143 aa8.17□□□□□ -1.1
CDH19-203ENST00000540086 B4E1Z4 1266 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 MCM5P33992 734 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 RHBDL3P58872 404 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
CDH19-203ENST00000540086 RASSF7Q02833 373 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 CUL4AQ13619 759 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 ME3Q16798 604 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 RRP12Q5JTH9 1297 aaKnown RBP8.16□□□□□ -1.1
CDH19-203ENST00000540086 MFSD6Q6ZSS7 791 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 NECAB1Q8N987 351 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 SP7Q8TDD2 431 aaPredicted RBP8.16□□□□□ -1.1
CDH19-203ENST00000540086 STAG1Q8WVM7 1258 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 TEKT1Q969V4 418 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
CDH19-203ENST00000540086 TOMM22Q9NS69 142 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 SAP30BPQ9UHR5 308 aaKnown RBP8.16□□□□□ -1.1
CDH19-203ENST00000540086 PCDHAC2Q9Y5I4 1007 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 MAST2Q6P0Q8 1798 aa8.16□□□□□ -1.1
CDH19-203ENST00000540086 PSMD14O00487 310 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 DTNBO60941 627 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 KDM4AO75164 1064 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 PRDM1O75626 825 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 PLCG2P16885 1265 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 DDIT3P35638 169 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 CRKP46108 304 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 APOBRQ0VD83 1088 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 ST3GAL1Q11201 340 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 STK3Q13188 491 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 CCDC83Q8IWF9 413 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 ZSCAN31Q96LW9 406 aaPredicted RBP8.15□□□□□ -1.1
CDH19-203ENST00000540086 VPS33BQ9H267 617 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 ARPP21Q9UBL0 812 aaPredicted RBP8.15□□□□□ -1.1
CDH19-203ENST00000540086 MKRN1Q9UHC7 482 aaKnown RBP8.15□□□□□ -1.1
CDH19-203ENST00000540086 ANAPC4Q9UJX5 808 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 ZNRF3Q9ULT6 936 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 FLT1P17948 1338 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 MYH13Q9UKX3 1938 aa8.15□□□□□ -1.1
CDH19-203ENST00000540086 RBM5P52756 815 aaKnown RBP eCLIP8.15□□□□□ -1.11
CDH19-203ENST00000540086 PICALMQ13492 652 aa8.15□□□□□ -1.11
CDH19-203ENST00000540086 APOBEC3HQ6NTF7 200 aaKnown RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 RSBN1LQ6PCB5 846 aaPredicted RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 HHIPL2Q6UWX4 724 aa8.15□□□□□ -1.11
CDH19-203ENST00000540086 IFNLR1Q8IU57 520 aaPredicted RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 CERS3Q8IU89 383 aa8.15□□□□□ -1.11
CDH19-203ENST00000540086 RNF41Q9H4P4 317 aaPredicted RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 CNNM2Q9H8M5 875 aa8.15□□□□□ -1.11
CDH19-203ENST00000540086 SH2B1Q9NRF2 756 aaPredicted RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 USP40Q9NVE5 1235 aa8.15□□□□□ -1.11
CDH19-203ENST00000540086 CHMP5Q9NZZ3 219 aa8.15□□□□□ -1.11
CDH19-203ENST00000540086 NAP1L2Q9ULW6 460 aaPredicted RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.11
CDH19-203ENST00000540086 VIL1P09327 827 aaKnown RBP8.14□□□□□ -1.11
CDH19-203ENST00000540086 PRELPP51888 382 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 SBK1Q52WX2 424 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 CDC42EP5Q6NZY7 148 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 SAMD1Q6SPF0 538 aaPredicted RBP8.14□□□□□ -1.11
CDH19-203ENST00000540086 JDP2Q8WYK2 163 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 INTS4Q96HW7 963 aaKnown RBP8.14□□□□□ -1.11
CDH19-203ENST00000540086 AGXT2Q9BYV1 514 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 KRT23Q9C075 422 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 CHD4Q14839 1912 aa8.14□□□□□ -1.11
CDH19-203ENST00000540086 SH2B2O14492 632 aaPredicted RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 WDHD1O75717 1129 aaPredicted RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 CACNB3P54284 484 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 CXCL9Q07325 125 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 CFAP100Q494V2 611 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 C12orf60Q5U649 245 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 DYNLL2Q96FJ2 89 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 ZDHHC15Q96MV8 337 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 GMLQ99445 158 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 SENP2Q9HC62 589 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 ZSWIM5Q9P217 1185 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 SERPINA10Q9UK55 444 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 WDR19Q8NEZ3 1342 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 LTBP3Q9NS15 1303 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 KLF18A0A0U1RQI7 1052 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 SPDYE4A6NLX3 237 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 IFIT3O14879 490 aaKnown RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 RANBP6O60518 1105 aaKnown RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 PLCD1P51178 756 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 HDLBPQ00341 1268 aaKnown RBP8.13□□□□□ -1.11
CDH19-203ENST00000540086 NFIAQ12857 509 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 TMEM67Q5HYA8 995 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 RAB11FIP4Q86YS3 637 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 AMOTL1Q8IY63 956 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 SLC44A5Q8NCS7 719 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 ESR2Q92731 530 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 MRIQ9BWK5 157 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms