RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 FGAP02671 866 aa22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 TGFBRAP1Q8WUH2 860 aa22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 KLRG1Q96E93 195 aa22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 RPAP1Q9BWH6 1393 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 UPF2Q9HAU5 1272 aaKnown RBP22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 DCP1AQ9NPI6 582 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF1A-213ENST00000540022 USP5P45974 858 aa22.59■■□□□ 1.21
TNFRSF1A-213ENST00000540022 CACNB3P54284 484 aa22.59■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ALX1Q15699 326 aa22.59■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ATP8A2Q9NTI2 1148 aa22.59■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MKRN1Q9UHC7 482 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-213ENST00000540022 U3KPZ7 1027 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1A-213ENST00000540022 NFIAQ12857 509 aa22.58■■□□□ 1.21
TNFRSF1A-213ENST00000540022 NECTIN1Q15223 517 aa22.58■■□□□ 1.21
TNFRSF1A-213ENST00000540022 MAPKAPK5Q8IW41 473 aa22.58■■□□□ 1.21
TNFRSF1A-213ENST00000540022 NACAP1Q9BZK3 213 aa22.58■■□□□ 1.21
TNFRSF1A-213ENST00000540022 ZNF70Q9UC06 446 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1A-213ENST00000540022 CLRN2A0PK11 232 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 GIMAP6Q6P9H5 292 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 C22orf23Q9BZE7 217 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 NAPBQ9H115 298 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 DDX4Q9NQI0 724 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 SCAF8Q9UPN6 1271 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 FLT1P17948 1338 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 HSPA4P34932 840 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 TDO2P48775 406 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 PICALMQ13492 652 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 SPDYE2Q495Y8 402 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 IDI2Q9BXS1 227 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 CREBZFQ9NS37 354 aa22.57■■□□□ 1.2
TNFRSF1A-213ENST00000540022 ZMYM6O95789 1325 aa22.56■■□□□ 1.2
TNFRSF1A-213ENST00000540022 FAM198AQ9UFP1 575 aa22.56■■□□□ 1.2
TNFRSF1A-213ENST00000540022 CTNNA3Q9UI47 895 aa22.56■■□□□ 1.2
TNFRSF1A-213ENST00000540022 MYO1BO43795 1136 aa22.55■■□□□ 1.2
TNFRSF1A-213ENST00000540022 CREB3L3Q68CJ9 461 aa22.55■■□□□ 1.2
TNFRSF1A-213ENST00000540022 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
TNFRSF1A-213ENST00000540022 PALD1Q9ULE6 856 aa22.55■■□□□ 1.2
TNFRSF1A-213ENST00000540022 USP17L12C9JPN9 530 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 USP17L21D6R901 530 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 SLC27A2O14975 620 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 CYP21A2P08686 494 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 CTR9Q6PD62 1173 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 DDRGK1Q96HY6 314 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 MCM9Q9NXL9 1143 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 TMOD2Q9NZR1 351 aa22.54■■□□□ 1.2
TNFRSF1A-213ENST00000540022 MCCP23508 829 aa22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 RBM25P49756 843 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 ZFPM1Q8IX07 1006 aa22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 RASEFQ8IZ41 740 aa22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 VEZTQ9HBM0 779 aa22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 SAP30BPQ9UHR5 308 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 TAF6LQ9Y6J9 622 aa22.53■■□□□ 1.2
TNFRSF1A-213ENST00000540022 CYP2D7A0A087X1C5 515 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 TCP10L2B9ZVM9 353 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 NPM3O75607 178 aaKnown RBP22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 HAND2P61296 217 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 TCP10Q12799 353 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 ANGEL2Q5VTE6 544 aaKnown RBP22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 DLK2Q6UY11 383 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 JMYQ8N9B5 988 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 KCNB2Q92953 911 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 OSBPL5Q9H0X9 879 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 GGA3Q9NZ52 723 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 PGAP2Q9UHJ9 254 aa22.52■■□□□ 1.2
TNFRSF1A-213ENST00000540022 SMIM22K7EJ46 135 aa22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 CYP2D6P10635 497 aa22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 EVX2Q03828 476 aa22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 IMMTQ16891 758 aaKnown RBP22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 SLC4A8Q2Y0W8 1093 aa22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 SBK1Q52WX2 424 aa22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ARPP21Q9UBL0 812 aaPredicted RBP22.52■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TMEM88BA6NKF7 163 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 MINDY4BA8MYZ0 360 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ZNF213O14771 459 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ENTPD3O75355 529 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 RNF20Q5VTR2 975 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 FKBP1CQ5VVH2 108 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 SNX14Q9Y5W7 946 aa22.51■■□□□ 1.19
TNFRSF1A-213ENST00000540022 PPARAQ07869 468 aa22.5■■□□□ 1.19
TNFRSF1A-213ENST00000540022 C12orf60Q5U649 245 aa22.5■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ZC3H15Q8WU90 426 aaKnown RBP22.5■■□□□ 1.19
TNFRSF1A-213ENST00000540022 NBPF3Q9H094 633 aa22.5■■□□□ 1.19
TNFRSF1A-213ENST00000540022 CNTNAP1P78357 1384 aa22.49■■□□□ 1.19
TNFRSF1A-213ENST00000540022 POLR3DP05423 398 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1A-213ENST00000540022 PLCD1P51178 756 aa22.49■■□□□ 1.19
TNFRSF1A-213ENST00000540022 SH3BP5LQ7L8J4 393 aa22.49■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TRAF5O00463 557 aa22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ZKSCAN1P17029 563 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 CTDSPL2Q05D32 466 aa22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TSGA10IPQ3SY00 556 aa22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TBC1D10CQ8IV04 446 aa22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 FAM151AQ8WW52 585 aa22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ANAPC4Q9UJX5 808 aa22.48■■□□□ 1.19
TNFRSF1A-213ENST00000540022 DDTLA6NHG4 134 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ANAPC15P60006 121 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 STOX1Q6ZVD7 989 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 FAM83AQ86UY5 434 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 KIF2CQ99661 725 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TACC3Q9Y6A5 838 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms