RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 CUL4AQ13619 759 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 RAB11FIP4Q86YS3 637 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 NIM1KQ8IY84 436 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 TEKT1Q969V4 418 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 SUGT1Q9Y2Z0 365 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 DDIT3P35638 169 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 CACNB3P54284 484 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 ANKRD1Q15327 319 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 USP40Q9NVE5 1235 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 ZSWIM5Q9P217 1185 aa12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
PABPC1P4-201ENST00000539977 KIAA1551Q9HCM1 1747 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 PLCD1P51178 756 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 STAG1Q8WVM7 1258 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 DYNLL2Q96FJ2 89 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 ALDH8A1Q9H2A2 487 aaPredicted RBP12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 SENP2Q9HC62 589 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 ZNRF3Q9ULT6 936 aa12.22□□□□□ -0.45
PABPC1P4-201ENST00000539977 PPFIA3O75145 1194 aa12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 CXCL9Q07325 125 aa12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 PKP1Q13835 747 aa12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 CDC42EP5Q6NZY7 148 aa12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 DDX4Q9NQI0 724 aaKnown RBP12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 ANAPC4Q9UJX5 808 aa12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 FLT1P17948 1338 aa12.21□□□□□ -0.45
PABPC1P4-201ENST00000539977 SCN9AQ15858 1988 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 RANBP6O60518 1105 aaKnown RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 IGSF3O75054 1194 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 POLR3DP05423 398 aaPredicted RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 PLCG2P16885 1265 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 CCT2P78371 535 aaKnown RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 NFIAQ12857 509 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 HHIPL2Q6UWX4 724 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 SLC44A5Q8NCS7 719 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 JDP2Q8WYK2 163 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 CHMP5Q9NZZ3 219 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 ARPP21Q9UBL0 812 aaPredicted RBP12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.46
PABPC1P4-201ENST00000539977 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 FKBP1AP62942 108 aaKnown RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 FAM47AQ5JRC9 791 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 AGXT2Q9BYV1 514 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 KRT23Q9C075 422 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 RNF41Q9H4P4 317 aaPredicted RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 CNNM2Q9H8M5 875 aa12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 NCOA5Q9HCD5 579 aaKnown RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
PABPC1P4-201ENST00000539977 KLF18A0A0U1RQI7 1052 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 SHTN1A0MZ66 631 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 SLURP2P0DP57 97 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 TCP10Q12799 353 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 SBK1Q52WX2 424 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 RXRAP19793 462 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 SCRN1Q12765 414 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 IGDCC4Q8TDY8 1250 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 PRMT6Q96LA8 375 aaPredicted RBP12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 GMLQ99445 158 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 MYL10Q9BUA6 226 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 VPS33BQ9H267 617 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 TDRD3Q9H7E2 651 aaKnown RBP12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
PABPC1P4-201ENST00000539977 MAST2Q6P0Q8 1798 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 NMT2O60551 498 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 NFXL1Q6ZNB6 911 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 CERS3Q8IU89 383 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 ESR2Q92731 530 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 LY9Q9HBG7 655 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 SMC3Q9UQE7 1217 aa12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
PABPC1P4-201ENST00000539977 GOLGA8BA8MQT2 603 aa12.17□□□□□ -0.46
PABPC1P4-201ENST00000539977 JAK2O60674 1132 aa12.17□□□□□ -0.46
PABPC1P4-201ENST00000539977 NBR1Q14596 966 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms