RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 LAMB4A4D0S4 1761 aa7.15□□□□□ -1.26
NOVA1-206ENST00000539517 NUP188Q5SRE5 1749 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 TNS1Q9HBL0 1735 aaKnown RBP7.15□□□□□ -1.27
NOVA1-206ENST00000539517 A0A1B0GVL5 298 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 KIF28PB7ZC32 967 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 SF3A1Q15459 793 aaKnown RBP7.15□□□□□ -1.27
NOVA1-206ENST00000539517 RC3H1Q5TC82 1133 aaKnown RBP7.15□□□□□ -1.27
NOVA1-206ENST00000539517 LRSAM1Q6UWE0 723 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 COL23A1Q86Y22 540 aaPredicted RBP7.15□□□□□ -1.27
NOVA1-206ENST00000539517 MAPKAPK5Q8IW41 473 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 IGDCC4Q8TDY8 1250 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 TGFBRAP1Q8WUH2 860 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 UBAC1Q9BSL1 405 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 CPVLQ9H3G5 476 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 CLIC4Q9Y696 253 aa7.15□□□□□ -1.27
NOVA1-206ENST00000539517 RAD21O60216 631 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 MMP10P09238 476 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 SCNN1DP51172 638 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 GTF2IP78347 998 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 EN1Q05925 392 aaPredicted RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 NSUN4Q96CB9 384 aaKnown RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 ALG1Q9BT22 464 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 VEGFAP15692 232 aaPredicted RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 USP5P45974 858 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 PICALMQ13492 652 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 POLLQ9UGP5 575 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 ERICH2A1L162 156 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 RESTQ13127 1097 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 WTAPQ15007 396 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 SLC10A5Q5PT55 438 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 ILDR1Q86SU0 546 aaPredicted RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 ZNF274Q96GC6 653 aaPredicted RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 RIOK1Q9BRS2 568 aaKnown RBP7.14□□□□□ -1.27
NOVA1-206ENST00000539517 TSPY26PQ9H489 355 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 LY9Q9HBG7 655 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 MRVI1Q9Y6F6 885 aa7.14□□□□□ -1.27
NOVA1-206ENST00000539517 G3V3G9 751 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 BIN1O00499 593 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 IARSP41252 1262 aaKnown RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 EIF6P56537 245 aaKnown RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 DCAF8Q5TAQ9 597 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 COL1A1P02452 1464 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 BTBD18B2RXH4 712 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SH2B2O14492 632 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 PTMAP06454 111 aaKnown RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 LDHBP07195 334 aaKnown RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 PTMSP20962 102 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 CHRNA5P30532 468 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 CACNB3P54284 484 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 ZNF445P59923 1031 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 NR5A1Q13285 461 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 GRAPQ13588 217 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 MFSD14BQ5SR56 506 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 CTR9Q6PD62 1173 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SYNE3Q6ZMZ3 975 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 DEFB132Q7Z7B7 95 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 LUZP1Q86V48 1076 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SPC24Q8NBT2 197 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SMARCC2Q8TAQ2 1214 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 GRAPLQ8TC17 118 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SH3RF3Q8TEJ3 882 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SPOCK2Q92563 424 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 ZNF512BQ96KM6 892 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 DBNDD1Q9H9R9 158 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 ISY1Q9ULR0 285 aaKnown RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 STX8Q9UNK0 236 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 TNKSO95271 1327 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 ST5P78524 1137 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SYAP1Q96A49 352 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 TNMDQ9H2S6 317 aa7.13□□□□□ -1.27
NOVA1-206ENST00000539517 FAM217BQ9NTX9 383 aaPredicted RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 SCAF8Q9UPN6 1271 aaKnown RBP7.13□□□□□ -1.27
NOVA1-206ENST00000539517 USP17L3A6NCW0 530 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 USP17L4A6NCW7 530 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 TSPY2A6NKD2 308 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 PLCD1P51178 756 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 USP17L1Q7RTZ2 530 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 CLEC10AQ8IUN9 316 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 CCAR1Q8IX12 1150 aaKnown RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 FBXO18Q8NFZ0 1043 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 CLIC6Q96NY7 704 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 AGXT2Q9BYV1 514 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 DCP1AQ9NPI6 582 aaPredicted RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 PCDHAC2Q9Y5I4 1007 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 V9GY48 417 aaPredicted RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 FAM205CA6NFA0 338 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 ONECUT3O60422 494 aaPredicted RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 GOLGA8HP0CJ92 632 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 STK38Q15208 465 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 CCDC183Q5T5S1 534 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 KRT40Q6A162 431 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 SCAND2PQ9GZW5 306 aaPredicted RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 NUP62CLQ9H1M0 184 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 VPS54Q9P1Q0 977 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 DHX16O60231 1041 aaKnown RBP7.12□□□□□ -1.27
NOVA1-206ENST00000539517 PLEKHA8P1O95397 391 aa7.12□□□□□ -1.27
NOVA1-206ENST00000539517 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms