RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 DNAI1Q9UI46 699 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 COL5A2P05997 1499 aaPredicted RBP6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ALDH1L1O75891 902 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CAVIN2O95810 425 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SMTNP53814 917 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RBM43Q6ZSC3 357 aaKnown RBP6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZGPATQ8N5A5 531 aaKnown RBP6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LRRN4CLQ8ND94 238 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RABGGTAQ92696 567 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MYO6Q9UM54 1294 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TPD52L2O43399 206 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GADD45BO75293 160 aaPredicted RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SEC31AO94979 1220 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CWF19L2Q2TBE0 894 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LRRFIP1Q32MZ4 808 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DPY19L2Q6NUT2 758 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MTHFD1LQ6UB35 978 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 USP48Q86UV5 1035 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 APLFQ8IW19 511 aaPredicted RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 OGFOD1Q8N543 542 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SAMD3Q8N6K7 520 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CEP112Q8N8E3 955 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SPC24Q8NBT2 197 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KCNN1Q92952 543 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 HOOK2Q96ED9 719 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MTA3Q9BTC8 594 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FAM169AQ9Y6X4 670 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ABCA3Q99758 1704 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PARP4Q9UKK3 1724 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ERICH2A1L162 156 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ST18O60284 1047 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SURF6O75683 361 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC192P0DO97 292 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZNF24P17028 368 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ROR2Q01974 943 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MTX1Q13505 466 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SNX1Q13596 522 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LAMB3Q13751 1172 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KLHL10Q6JEL2 608 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TOM1L2Q6ZVM7 507 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC170Q8IYT3 715 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TTC5Q8N0Z6 440 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LINS1Q8NG48 757 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DTNBP1Q96EV8 351 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 BICD1Q96G01 975 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 POLR3CQ9BUI4 534 aaPredicted RBP6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 STAP2Q9UGK3 403 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GGA2Q9UJY4 613 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RAB21Q9UL25 225 aa6.56□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DDX58O95786 925 aaKnown RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TPP2P29144 1249 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 AARSP49588 968 aaKnown RBP eCLIP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TUBB4BP68371 445 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZBED6P86452 979 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 AIMP1Q12904 312 aaKnown RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MKRN4PQ13434 485 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SLMAPQ14BN4 828 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ZNF280DQ6N043 979 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SPDYE1Q8NFV5 336 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RMDN2Q96LZ7 410 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ACBD3Q9H3P7 528 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 IL1RAPL2Q9NP60 686 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 C9orf78Q9NZ63 289 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CORO1CQ9ULV4 474 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PCDHGC5Q9Y5F6 944 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TUBGCP6Q96RT7 1819 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GLI3P10071 1580 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PCDH11XQ9BZA7 1347 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PCDH11YQ9BZA8 1340 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SNRPA1P09661 255 aaKnown RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MYL6BP14649 208 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CABP4P57796 275 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC15Q0P6D6 951 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 IFT88Q13099 833 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PKN1Q16512 942 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LONRF2Q1L5Z9 754 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FOXD4L6Q3SYB3 417 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SFMBT2Q5VUG0 894 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MYSM1Q5VVJ2 828 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FOXD4L3Q6VB84 417 aaPredicted RBP6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LRP10Q7Z4F1 713 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CACTIN-AS1Q8N1I8 211 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RHPN1Q8TCX5 695 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MIPOL1Q8TD10 442 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LMBR1Q8WVP7 490 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ALS2CR12Q96Q35 445 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TMEM98Q9Y2Y6 226 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 USP16Q9Y5T5 823 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NHSL1Q5SYE7 1610 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 UTYO14607 1347 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TCHHQ07283 1943 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 F8VZ95 297 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 INPP5BP32019 993 aa6.55□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TRPC1P48995 793 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms