RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 LRRFIP1Q32MZ4 808 aaKnown RBP8.05□□□□□ -1.12
PROM1-219ENST00000539194 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 KRT40Q6A162 431 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 TOM1L2Q6ZVM7 507 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 REXO1L1PQ8IX06 675 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 DPF2Q92785 391 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 TNFRSF25Q93038 417 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 PPP1R13BQ96KQ4 1090 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 FBXO2Q9UK22 296 aaPredicted RBP8.05□□□□□ -1.12
PROM1-219ENST00000539194 MROH5Q6ZUA9 1318 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
PROM1-219ENST00000539194 IFNAR1P17181 557 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 GUCY1A2P33402 732 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 EIF5P55010 431 aaKnown RBP8.05□□□□□ -1.12
PROM1-219ENST00000539194 PDE4BQ07343 736 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 SF3A1Q15459 793 aaKnown RBP8.05□□□□□ -1.12
PROM1-219ENST00000539194 KMT5BQ4FZB7 885 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 CCDC73Q6ZRK6 1079 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 CEP57L1Q8IYX8 460 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 ZNF384Q8TF68 577 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 UBXN6Q9BZV1 441 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 INCENPQ9NQS7 918 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
PROM1-219ENST00000539194 TNRC6CQ9HCJ0 1690 aaKnown RBP8.05□□□□□ -1.12
PROM1-219ENST00000539194 PDE8AO60658 829 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 POLR3DP05423 398 aaPredicted RBP8.04□□□□□ -1.12
PROM1-219ENST00000539194 SH3RF1Q7Z6J0 888 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 LRRN4CLQ8ND94 238 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 ATP1A3P13637 1013 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 FECHP22830 423 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 IL6STP40189 918 aaPredicted RBP8.04□□□□□ -1.12
PROM1-219ENST00000539194 RASGRF1Q13972 1273 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 LONRF3Q496Y0 759 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 ZNF579Q8NAF0 562 aaKnown RBP8.04□□□□□ -1.12
PROM1-219ENST00000539194 KIF18AQ8NI77 898 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 MMP1P03956 469 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 PBX1P40424 430 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 GRIN1Q05586 938 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 SLC9C2Q5TAH2 1124 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 ADGRA1Q86SQ6 560 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 PDCL2Q8N4E4 241 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 LPIN2Q92539 896 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 ZBTB1Q9Y2K1 713 aa8.04□□□□□ -1.12
PROM1-219ENST00000539194 ACTN4O43707 911 aaKnown RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 PTPREP23469 700 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 PUM3Q15397 648 aaKnown RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 PKN1Q16512 942 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 VSTM4Q8IW00 320 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 TMOD3Q9NYL9 352 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 MYH8P13535 1937 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 HSPA2P54652 639 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 MORC3Q14149 939 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 ZNF215Q9UL58 517 aaPredicted RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 IRS4O14654 1257 aaPredicted RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 CUTAO60888 179 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 DNTTIP2Q5QJE6 756 aaKnown RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 KRBA2Q6ZNG9 492 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 CCDC150Q8NCX0 1101 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 NAT10Q9H0A0 1025 aaKnown RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 FOXP1Q9H334 677 aaPredicted RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 NAV1Q8NEY1 1877 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 B4E1Z4 1266 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 NTSR2O95665 410 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
PROM1-219ENST00000539194 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 LDHAL6AQ6ZMR3 332 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 SPATA5Q8NB90 893 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 PHKBQ93100 1093 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 ALG1Q9BT22 464 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 OGFRQ9NZT2 677 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 IFNKQ9P0W0 207 aa8.03□□□□□ -1.12
PROM1-219ENST00000539194 PHLPP2Q6ZVD8 1323 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 A0A087X0B3 334 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 CAMTA2O94983 1202 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 ZRANB2O95218 330 aaKnown RBP eCLIP8.02□□□□□ -1.13
PROM1-219ENST00000539194 METAP2P50579 478 aaKnown RBP eCLIP8.02□□□□□ -1.13
PROM1-219ENST00000539194 FOSBP53539 338 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 FANCCQ00597 558 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 NOSTRINQ8IVI9 506 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 CLIC6Q96NY7 704 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.02□□□□□ -1.13
PROM1-219ENST00000539194 ATAD5Q96QE3 1844 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 ANKRD18BA2A2Z9 1011 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 GOLGA6L19H0YKK7 550 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 FOXN1O15353 648 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 TUBB4AP04350 444 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 UQCRFS1P1P0C7P4 283 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 SUSD4Q5VX71 490 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 FCHSD1Q86WN1 690 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 CRACR2BQ8N4Y2 399 aaPredicted RBP8.02□□□□□ -1.13
PROM1-219ENST00000539194 ERO1AQ96HE7 468 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 RIOK1Q9BRS2 568 aaKnown RBP8.02□□□□□ -1.13
PROM1-219ENST00000539194 VWA3AA6NCI4 1184 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 FMR1Q06787 632 aaKnown RBP eCLIP8.02□□□□□ -1.13
PROM1-219ENST00000539194 PNOCQ13519 176 aa8.02□□□□□ -1.13
PROM1-219ENST00000539194 METTL24Q5JXM2 366 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms