RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
PACS1-214ENST00000533811 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
PACS1-214ENST00000533811 DOCK1Q14185 1865 aa11.59□□□□□ -0.55
PACS1-214ENST00000533811 A0A0G2JLL6 359 aaPredicted RBP11.58□□□□□ -0.56
PACS1-214ENST00000533811 TRIM75PA6NK02 468 aa11.58□□□□□ -0.56
PACS1-214ENST00000533811 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
PACS1-214ENST00000533811 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
PACS1-214ENST00000533811 NECAB2Q7Z6G3 386 aa11.58□□□□□ -0.56
PACS1-214ENST00000533811 PRRT2Q7Z6L0 340 aaPredicted RBP11.58□□□□□ -0.56
PACS1-214ENST00000533811 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
PACS1-214ENST00000533811 DIS3LQ8TF46 1054 aaKnown RBP11.58□□□□□ -0.56
PACS1-214ENST00000533811 COA7Q96BR5 231 aa11.58□□□□□ -0.56
PACS1-214ENST00000533811 LRRFIP2Q9Y608 721 aaKnown RBP11.58□□□□□ -0.56
PACS1-214ENST00000533811 PHIPQ8WWQ0 1821 aa11.58□□□□□ -0.56
PACS1-214ENST00000533811 PTPRAP18433 802 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 FGFR2P21802 821 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 RGS3P49796 1198 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
PACS1-214ENST00000533811 DEFB123Q8N688 67 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 LPIN2Q92539 896 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 MRS2Q9HD23 443 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.57□□□□□ -0.56
PACS1-214ENST00000533811 UTYO14607 1347 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 COL6A3P12111 3177 aa11.57□□□□□ -0.56
PACS1-214ENST00000533811 SLURP2P0DP57 97 aa11.56□□□□□ -0.56
PACS1-214ENST00000533811 SYN1P17600 705 aa11.56□□□□□ -0.56
PACS1-214ENST00000533811 IRF5Q13568 498 aa11.56□□□□□ -0.56
PACS1-214ENST00000533811 DDX60LQ5H9U9 1706 aaKnown RBP11.56□□□□□ -0.56
PACS1-214ENST00000533811 Q7L0L9 218 aa11.56□□□□□ -0.56
PACS1-214ENST00000533811 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.56□□□□□ -0.56
PACS1-214ENST00000533811 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
PACS1-214ENST00000533811 AFG3L2Q9Y4W6 797 aa11.56□□□□□ -0.56
PACS1-214ENST00000533811 PHF20L1A8MW92 1017 aa11.55□□□□□ -0.56
PACS1-214ENST00000533811 EYA2O00167 538 aa11.55□□□□□ -0.56
PACS1-214ENST00000533811 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
PACS1-214ENST00000533811 PICALMQ13492 652 aa11.55□□□□□ -0.56
PACS1-214ENST00000533811 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
PACS1-214ENST00000533811 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
PACS1-214ENST00000533811 SIL1Q9H173 461 aa11.55□□□□□ -0.56
PACS1-214ENST00000533811 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
PACS1-214ENST00000533811 CUL9Q8IWT3 2517 aa11.55□□□□□ -0.56
PACS1-214ENST00000533811 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 LAMA3Q16787 3333 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 ATAD5Q96QE3 1844 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 CAPN2P17655 700 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 ATP2B3Q16720 1220 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 TREML2Q5T2D2 321 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 DZIP1Q86YF9 867 aaKnown RBP11.54□□□□□ -0.56
PACS1-214ENST00000533811 GDF15Q99988 308 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 AGTPBP1Q9UPW5 1226 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 SLC45A1Q9Y2W3 748 aa11.54□□□□□ -0.56
PACS1-214ENST00000533811 DDTLA6NHG4 134 aaPredicted RBP11.53□□□□□ -0.56
PACS1-214ENST00000533811 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
PACS1-214ENST00000533811 ENTPD3O75355 529 aa11.53□□□□□ -0.56
PACS1-214ENST00000533811 HMGCRP04035 888 aa11.53□□□□□ -0.56
PACS1-214ENST00000533811 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
PACS1-214ENST00000533811 PHKA1P46020 1223 aa11.53□□□□□ -0.56
PACS1-214ENST00000533811 TRIM32Q13049 653 aa11.53□□□□□ -0.56
PACS1-214ENST00000533811 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
PACS1-214ENST00000533811 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
PACS1-214ENST00000533811 DENND2AQ9ULE3 1009 aa11.53□□□□□ -0.56
PACS1-214ENST00000533811 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 BMP8BP34820 402 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 FAM110CQ1W6H9 321 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 TDHQ8IZJ6 230 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 IDI2Q9BXS1 227 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 UBE2OQ9C0C9 1292 aaKnown RBP11.52□□□□□ -0.57
PACS1-214ENST00000533811 NBPF3Q9H094 633 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 C11orf49Q9H6J7 331 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
PACS1-214ENST00000533811 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 ABCF2Q9UG63 623 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 RPTORQ8N122 1335 aa11.52□□□□□ -0.57
PACS1-214ENST00000533811 LOC285556D6RIA3 1793 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 BTDP43251 543 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
PACS1-214ENST00000533811 HMGCS2P54868 508 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
PACS1-214ENST00000533811 MRPL50Q8N5N7 158 aaKnown RBP11.51□□□□□ -0.57
PACS1-214ENST00000533811 USP44Q9H0E7 712 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.51□□□□□ -0.573e-7■■■■■ 34.2
PACS1-214ENST00000533811 STXBP5LQ9Y2K9 1186 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 SALL1Q9NSC2 1324 aa11.51□□□□□ -0.57
PACS1-214ENST00000533811 CYP2B6P20813 491 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 ADORA1P30542 326 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 GCLCP48506 637 aaPredicted RBP11.5□□□□□ -0.57
PACS1-214ENST00000533811 SPP2Q13103 211 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.57
PACS1-214ENST00000533811 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 SLF2Q8IX21 1173 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
PACS1-214ENST00000533811 MTMR10Q9NXD2 777 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 PLXNB2O15031 1838 aa11.5□□□□□ -0.57
PACS1-214ENST00000533811 GAKO14976 1311 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms