RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 EIF2S2P20042 333 aaKnown RBP9.78□□□□□ -0.84
CASP4-212ENST00000533730 PTGIRP43119 386 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 MSL1Q68DK7 614 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 NBPF10Q6P3W6 841 aaKnown RBP9.78□□□□□ -0.84
CASP4-212ENST00000533730 NBPF15Q8N660 670 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 COL26A1Q96A83 441 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 RBCK1Q9BYM8 510 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 DDX21Q9NR30 783 aaKnown RBP eCLIP9.78□□□□□ -0.84
CASP4-212ENST00000533730 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 DBF4Q9UBU7 674 aaPredicted RBP9.78□□□□□ -0.84
CASP4-212ENST00000533730 FANCIQ9NVI1 1328 aa9.78□□□□□ -0.84
CASP4-212ENST00000533730 SENP3-EIF4A1A0A087X0R7 540 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 HDLBPQ00341 1268 aaKnown RBP9.77□□□□□ -0.85
CASP4-212ENST00000533730 RELBQ01201 579 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 C9orf131Q5VYM1 1079 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 USPL1Q5W0Q7 1092 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 CLEC4GQ6UXB4 293 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 KIF6Q6ZMV9 814 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 CYP2U1Q7Z449 544 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 UBXN4Q92575 508 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 TSR2Q969E8 191 aaKnown RBP9.77□□□□□ -0.85
CASP4-212ENST00000533730 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
CASP4-212ENST00000533730 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.85
CASP4-212ENST00000533730 PARP3Q9Y6F1 533 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 SCN7AQ01118 1682 aa9.77□□□□□ -0.85
CASP4-212ENST00000533730 POTECB2RU33 542 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 ERVV-1B6SEH8 477 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 CAMTA2O94983 1202 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 FAM13AO94988 1023 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 MMP10P09238 476 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 MYL6BP14649 208 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 NPR3P17342 541 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 MPSTP25325 297 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 PIP4K2AP48426 406 aaPredicted RBP9.76□□□□□ -0.85
CASP4-212ENST00000533730 SF3A1Q15459 793 aaKnown RBP9.76□□□□□ -0.85
CASP4-212ENST00000533730 KRT24Q2M2I5 525 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 CCDC30Q5VVM6 783 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 C8orf58Q8NAV2 365 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
CASP4-212ENST00000533730 SCAMP3O14828 347 aaKnown RBP9.75□□□□□ -0.85
CASP4-212ENST00000533730 GNRH1P01148 92 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 IGFBP4P22692 258 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 SCARF1Q14162 830 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 TWISTNBQ3B726 338 aaPredicted RBP9.75□□□□□ -0.85
CASP4-212ENST00000533730 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 LDLRAD1Q5T700 205 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 CHPF2Q9P2E5 772 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 CD2APQ9Y5K6 639 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 MAP3K15Q6ZN16 1313 aa9.75□□□□□ -0.85
CASP4-212ENST00000533730 BCORQ6W2J9 1755 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 ELL2O00472 640 aaPredicted RBP9.74□□□□□ -0.85
CASP4-212ENST00000533730 NDUFB5O43674 189 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 SMARCA5O60264 1052 aaPredicted RBP9.74□□□□□ -0.85
CASP4-212ENST00000533730 UPP2O95045 317 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 BMP2P12643 396 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 TM4SF1P30408 202 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.85
CASP4-212ENST00000533730 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
CASP4-212ENST00000533730 ZNF395Q9H8N7 513 aaPredicted RBP9.74□□□□□ -0.85
CASP4-212ENST00000533730 CARMIL3Q8ND23 1372 aa9.74□□□□□ -0.85
CASP4-212ENST00000533730 POLRMTO00411 1230 aaKnown RBP9.73□□□□□ -0.85
CASP4-212ENST00000533730 TREHO43280 583 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 STAU1O95793 577 aaKnown RBP9.73□□□□□ -0.85
CASP4-212ENST00000533730 SCNN1DP51172 638 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 HNRNPUQ00839 825 aaKnown RBP eCLIP9.73□□□□□ -0.85
CASP4-212ENST00000533730 EXOSC9Q06265 439 aaKnown RBP9.73□□□□□ -0.85
CASP4-212ENST00000533730 SLFN5Q08AF3 891 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 NFIXQ14938 502 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 HSP90AB3PQ58FF7 597 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 LRP10Q7Z4F1 713 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 SCG3Q8WXD2 468 aaKnown RBP9.73□□□□□ -0.85
CASP4-212ENST00000533730 FAM161BQ96MY7 647 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 SETDB2Q96T68 719 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 HRH3Q9Y5N1 445 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 ATP10DQ9P241 1426 aa9.73□□□□□ -0.85
CASP4-212ENST00000533730 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 DDX58O95786 925 aaKnown RBP9.72□□□□□ -0.85
CASP4-212ENST00000533730 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
CASP4-212ENST00000533730 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
CASP4-212ENST00000533730 DDR1Q08345 913 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 CLN3Q13286 438 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 PROSER3Q2NL68 480 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 TBC1D9BQ66K14 1250 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 TTLL7Q6ZT98 887 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 COPS6Q7L5N1 327 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 XAGE3Q8WTP9 111 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
CASP4-212ENST00000533730 SYT17Q9BSW7 474 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 ETNK1Q9HBU6 452 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 C10orf71Q711Q0 1435 aa9.72□□□□□ -0.85
CASP4-212ENST00000533730 NPHP1O15259 732 aa9.71□□□□□ -0.86
CASP4-212ENST00000533730 VAMP4O75379 141 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms