RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HLA-DOAP06340 250 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
BDNF-218ENST00000533246 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 MLH3Q9UHC1 1453 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 SLU7O95391 586 aaKnown RBP13.85□□□□□ -0.19
BDNF-218ENST00000533246 SATB1Q01826 763 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 SYNE4Q8N205 404 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 GJB4Q9NTQ9 266 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 FAM170AA1A519 330 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 BTBD18B2RXH4 712 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 PDE6AP16499 860 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 HNRNPH2P55795 449 aaKnown RBP13.84□□□□□ -0.19
BDNF-218ENST00000533246 PTPN12Q05209 780 aaKnown RBP13.84□□□□□ -0.19
BDNF-218ENST00000533246 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 CLIC6Q96NY7 704 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 NFE2L3Q9Y4A8 694 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 FANCCQ00597 558 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 DTHD1Q6ZMT9 781 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 IQUBQ8NA54 791 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 NRBP1Q9UHY1 535 aa13.84□□□□□ -0.19
BDNF-218ENST00000533246 PPP1R12BO60237 982 aaPredicted RBP13.84□□□□□ -0.19
BDNF-218ENST00000533246 NEFHP12036 1026 aa13.83□□□□□ -0.19
BDNF-218ENST00000533246 UBXN1Q04323 297 aa13.83□□□□□ -0.19
BDNF-218ENST00000533246 MICALL1Q8N3F8 863 aa13.83□□□□□ -0.19
BDNF-218ENST00000533246 CAPZA3Q96KX2 299 aa13.83□□□□□ -0.19
BDNF-218ENST00000533246 GPCPD1Q9NPB8 672 aa13.83□□□□□ -0.19
BDNF-218ENST00000533246 ERBB3P21860 1342 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 TOM1O60784 492 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 IGKV5-2P06315 115 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 PNOCQ13519 176 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 LONRF3Q496Y0 759 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 CUL5Q93034 780 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 DSCC1Q9BVC3 393 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 ELP1O95163 1332 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 PREX2Q70Z35 1606 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 PDIA3P30101 505 aaKnown RBP13.83□□□□□ -0.2
BDNF-218ENST00000533246 GNAQP50148 359 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 ST5P78524 1137 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 ZNF569Q5MCW4 686 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 TMEM94Q12767 1356 aa13.83□□□□□ -0.2
BDNF-218ENST00000533246 RHOXF2BP0C7M4 288 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 CTSWP56202 376 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 CUL4AQ13619 759 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 RHOXF2Q9BQY4 288 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
BDNF-218ENST00000533246 BMP15O95972 392 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 XPO4Q9C0E2 1151 aaKnown RBP13.82□□□□□ -0.2
BDNF-218ENST00000533246 DEXIO95424 95 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 OSBP2Q969R2 916 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 AIFM3Q96NN9 605 aa13.82□□□□□ -0.2
BDNF-218ENST00000533246 CYP27B1O15528 508 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 ERLIN2O94905 339 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 CHGBP05060 677 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 CCDC175P0C221 793 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 CALML3P27482 149 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 GSTO1P78417 241 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
BDNF-218ENST00000533246 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
BDNF-218ENST00000533246 IQCEQ6IPM2 695 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 NEK11Q8NG66 645 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 PCDHA7Q9UN72 937 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 ZFYVE16Q7Z3T8 1539 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 UFL1O94874 794 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 FGFR1OPO95684 399 aaKnown RBP13.81□□□□□ -0.2
BDNF-218ENST00000533246 CALM1P0DP23 149 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 CALM2P0DP24 149 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 CALM3P0DP25 149 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 BAG1Q99933 345 aaPredicted RBP13.81□□□□□ -0.2
BDNF-218ENST00000533246 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 CLIC4Q9Y696 253 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 RAD51AP2Q09MP3 1159 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 SYCP3Q8IZU3 236 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 ZNF513Q8N8E2 541 aaPredicted RBP13.81□□□□□ -0.2
BDNF-218ENST00000533246 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
BDNF-218ENST00000533246 ARFGAP3Q9NP61 516 aa13.81□□□□□ -0.2
BDNF-218ENST00000533246 NF2P35240 595 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 ZNF804AQ7Z570 1209 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 FAM107BQ9H098 131 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 GBP3Q9H0R5 595 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 COBLO75128 1261 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 PFKFB1P16118 471 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 NDUFA8P51970 172 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 TFAP4Q01664 338 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
BDNF-218ENST00000533246 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms