RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 KIF23Q02241 960 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-224ENST00000533129 PPP2R3AQ06190 1150 aa16.99■□□□□ 0.31
CAPN1-224ENST00000533129 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
CAPN1-224ENST00000533129 C4AP0C0L4 1744 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 C4BP0C0L5 1744 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 MAP3K15Q6ZN16 1313 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 VGLL3A8MV65 326 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
CAPN1-224ENST00000533129 JAKMIP3Q5VZ66 844 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 WDHD1O75717 1129 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-224ENST00000533129 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-224ENST00000533129 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 PSD3Q9NYI0 1048 aa16.98■□□□□ 0.31
CAPN1-224ENST00000533129 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 A0A0G2JS52 829 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
CAPN1-224ENST00000533129 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-224ENST00000533129 TBX2Q13207 712 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-224ENST00000533129 OLFM4Q6UX06 510 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 KRBA2Q6ZNG9 492 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 ZBTB1Q9Y2K1 713 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 STX10O60499 249 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 PPP6R2O75170 966 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 HSPA1LP34931 641 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 GNG11P61952 73 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 ISM2Q6H9L7 571 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 BAG1Q99933 345 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-224ENST00000533129 FUT8Q9BYC5 575 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
CAPN1-224ENST00000533129 TMEM232C9JQI7 657 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 HSP90AB3PQ58FF7 597 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 MEX3CQ5U5Q3 659 aaKnown RBP16.96■□□□□ 0.31
CAPN1-224ENST00000533129 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 IPO4Q8TEX9 1081 aaKnown RBP16.96■□□□□ 0.31
CAPN1-224ENST00000533129 EXOC4Q96A65 974 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 KIFC2Q96AC6 838 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 AK7Q96M32 723 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 WDR24Q96S15 920 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 GOLGA8BA8MQT2 603 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.31
CAPN1-224ENST00000533129 GOLGA1Q92805 767 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 PARD6BQ9BYG5 372 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 EPC1Q9H2F5 836 aa16.96■□□□□ 0.31
CAPN1-224ENST00000533129 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-224ENST00000533129 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 SIK1P57059 783 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 ZSCAN26Q16670 478 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 ZCCHC17Q9NP64 241 aaKnown RBP16.95■□□□□ 0.3
CAPN1-224ENST00000533129 INTS13Q9NVM9 706 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 CWC15Q9P013 229 aaKnown RBP16.95■□□□□ 0.3
CAPN1-224ENST00000533129 CCDC151A5D8V7 595 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 CPLX1O14810 134 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
CAPN1-224ENST00000533129 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 RREB1Q92766 1687 aa16.95■□□□□ 0.3
CAPN1-224ENST00000533129 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 FOXO4P98177 505 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 TMEM132AQ24JP5 1023 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 SHC4Q6S5L8 630 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-224ENST00000533129 CCDC34Q96HJ3 373 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 M0R2C6 588 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 PRC1O43663 620 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-224ENST00000533129 TXLNAP40222 546 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 PNOCQ13519 176 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 BRD3Q15059 726 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 MB21D2Q8IYB1 491 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-224ENST00000533129 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 NEUROD6Q96NK8 337 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 WDR19Q8NEZ3 1342 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 ERVV-1B6SEH8 477 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
CAPN1-224ENST00000533129 RESP18Q5W5W9 173 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
CAPN1-224ENST00000533129 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 MAP2K7O14733 419 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 PTPAQ15257 358 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
CAPN1-224ENST00000533129 ELOA2Q8IYF1 753 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-224ENST00000533129 TC2NQ8N9U0 490 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 IQUBQ8NA54 791 aa16.93■□□□□ 0.3
CAPN1-224ENST00000533129 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
CAPN1-224ENST00000533129 PCCAP05165 728 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-224ENST00000533129 IFIT1P09914 478 aaKnown RBP16.92■□□□□ 0.3
CAPN1-224ENST00000533129 LONRF2Q1L5Z9 754 aa16.92■□□□□ 0.3
CAPN1-224ENST00000533129 SPECC1LQ69YQ0 1117 aa16.92■□□□□ 0.3
CAPN1-224ENST00000533129 TOGARAM2Q6ZUX3 1019 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms