RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 STX1AQ16623 288 aa14.49□□□□□ -0.09
BDNF-215ENST00000530861 CCDC194A0A1B0GVG4 234 aa14.49□□□□□ -0.09
BDNF-215ENST00000530861 SMARCC1Q92922 1105 aaPredicted RBP14.49□□□□□ -0.09
BDNF-215ENST00000530861 KIF20BQ96Q89 1820 aa14.49□□□□□ -0.09
BDNF-215ENST00000530861 FAM205CA6NFA0 338 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 UBE2Q2Q8WVN8 375 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 SFPQP23246 707 aaKnown RBP eCLIP14.48□□□□□ -0.09
BDNF-215ENST00000530861 DPCR1Q3MIW9 517 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 SOGA3Q5TF21 947 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 STRBPQ96SI9 672 aaKnown RBP14.48□□□□□ -0.09
BDNF-215ENST00000530861 KRT23Q9C075 422 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 TXNRD3Q86VQ6 643 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 ZNF654Q8IZM8 581 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 FBXO18Q8NFZ0 1043 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
BDNF-215ENST00000530861 ZC3H12CQ9C0D7 883 aaKnown RBP14.48□□□□□ -0.09
BDNF-215ENST00000530861 GOLPH3LQ9H4A5 285 aa14.48□□□□□ -0.09
BDNF-215ENST00000530861 USP17L3A6NCW0 530 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 USP17L4A6NCW7 530 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 NAP1L1P55209 391 aaKnown RBP14.47□□□□□ -0.09
BDNF-215ENST00000530861 USP17L1Q7RTZ2 530 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 CLEC10AQ8IUN9 316 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 HOOK1Q9UJC3 728 aaKnown RBP14.47□□□□□ -0.09
BDNF-215ENST00000530861 CCDC196A0A1B0GTZ2 297 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 UBASH3AP57075 661 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 PDE4BQ07343 736 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 KIAA0825Q8IV33 1275 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 OXER1Q8TDS5 423 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 KIF28PB7ZC32 967 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 FOXN1O15353 648 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 SLURP2P0DP57 97 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 LONRF3Q496Y0 759 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 JAKMIP3Q5VZ66 844 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 CCDC112Q8NEF3 446 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 MXD3Q9BW11 206 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 CTDNEP1O95476 244 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 PFKFB1P16118 471 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
BDNF-215ENST00000530861 FAM160A1Q05DH4 1040 aa14.47□□□□□ -0.09
BDNF-215ENST00000530861 PLEKHA8P1O95397 391 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 CLSTN2Q9H4D0 955 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 ITSN1Q15811 1721 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 RESTQ13127 1097 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 NFIXQ14938 502 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 LETM2Q2VYF4 491 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 PARP10Q53GL7 1025 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 TEX11Q8IYF3 940 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 ARHGEF1Q92888 912 aaKnown RBP14.46□□□□□ -0.09
BDNF-215ENST00000530861 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 POLD4Q9HCU8 107 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 CARMIL3Q8ND23 1372 aa14.46□□□□□ -0.09
BDNF-215ENST00000530861 FRMPD2Q68DX3 1309 aaPredicted RBP14.46□□□□□ -0.1
BDNF-215ENST00000530861 URI1O94763 535 aaPredicted RBP14.46□□□□□ -0.1
BDNF-215ENST00000530861 MFSD14BQ5SR56 506 aa14.46□□□□□ -0.1
BDNF-215ENST00000530861 SOS2Q07890 1332 aaPredicted RBP14.45□□□□□ -0.1
BDNF-215ENST00000530861 TOP1P11387 765 aaKnown RBP14.45□□□□□ -0.1
BDNF-215ENST00000530861 KCNG4Q8TDN1 519 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 QTRT2Q9H974 415 aaKnown RBP14.45□□□□□ -0.1
BDNF-215ENST00000530861 NOL7Q9UMY1 257 aaKnown RBP14.45□□□□□ -0.1
BDNF-215ENST00000530861 MINPP1Q9UNW1 487 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 PEAK1Q9H792 1746 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 MROH5Q6ZUA9 1318 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 ATP1A3P13637 1013 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 CASP7P55210 303 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 PTPN14Q15678 1187 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 FANCBQ8NB91 859 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 LINC00116Q8NCU8 138 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 HINFPQ9BQA5 517 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 KCNH3Q9ULD8 1083 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
BDNF-215ENST00000530861 FNBP4Q8N3X1 1017 aaPredicted RBP14.45□□□□□ -0.1
BDNF-215ENST00000530861 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 SERTAD1Q9UHV2 236 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 MST1RQ04912 1400 aa14.45□□□□□ -0.1
BDNF-215ENST00000530861 APBA3O96018 575 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 KRT18P05783 430 aaKnown RBP14.44□□□□□ -0.1
BDNF-215ENST00000530861 PPARDQ03181 441 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
BDNF-215ENST00000530861 MNS1Q8NEH6 495 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 SMARCE1Q969G3 411 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 COL15A1P39059 1388 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 TRIM75PA6NK02 468 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 NAA30Q147X3 362 aaPredicted RBP14.44□□□□□ -0.1
BDNF-215ENST00000530861 DBNDD1Q9H9R9 158 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 PCDHB6Q9Y5E3 794 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 BAG3O95817 575 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 UBA7P41226 1012 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 ANTXR2P58335 489 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 MECOMQ03112 1051 aa14.44□□□□□ -0.1
BDNF-215ENST00000530861 CIAO1O76071 339 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 WASF1Q92558 559 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 TPM3P06753 285 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 FDPSP14324 419 aaKnown RBP14.43□□□□□ -0.1
BDNF-215ENST00000530861 TNNI2P48788 182 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 NAPAP54920 295 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 SNAP25P60880 206 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
BDNF-215ENST00000530861 USP49Q70CQ1 688 aa14.43□□□□□ -0.1
BDNF-215ENST00000530861 SEPT12Q8IYM1 358 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms