RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 NBPF9Q3BBW0 867 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
TTC39A-216ENST00000530004 CDC42EP5Q6NZY7 148 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 BLOC1S2Q6QNY1 142 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 TMX3Q96JJ7 454 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 TAF1DQ9H5J8 278 aaPredicted RBP17.1■□□□□ 0.33
TTC39A-216ENST00000530004 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
TTC39A-216ENST00000530004 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 APPP05067 770 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 PLCG2P16885 1265 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 AK2P54819 239 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
TTC39A-216ENST00000530004 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
TTC39A-216ENST00000530004 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 USP40Q9NVE5 1235 aa17.09■□□□□ 0.33
TTC39A-216ENST00000530004 MYO1BO43795 1136 aa17.08■□□□□ 0.33
TTC39A-216ENST00000530004 VEGFAP15692 232 aaPredicted RBP17.08■□□□□ 0.33
TTC39A-216ENST00000530004 RPS6KB1P23443 525 aa17.08■□□□□ 0.33
TTC39A-216ENST00000530004 COL9A3Q14050 684 aaPredicted RBP17.08■□□□□ 0.33
TTC39A-216ENST00000530004 STOX1Q6ZVD7 989 aa17.08■□□□□ 0.33
TTC39A-216ENST00000530004 USP50Q70EL3 339 aaPredicted RBP17.08■□□□□ 0.33
TTC39A-216ENST00000530004 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.33
TTC39A-216ENST00000530004 PATL2C9JE40 543 aaKnown RBP17.07■□□□□ 0.32
TTC39A-216ENST00000530004 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
TTC39A-216ENST00000530004 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
TTC39A-216ENST00000530004 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
TTC39A-216ENST00000530004 GNAT2P19087 354 aa17.07■□□□□ 0.32
TTC39A-216ENST00000530004 HAND2P61296 217 aa17.07■□□□□ 0.32
TTC39A-216ENST00000530004 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
TTC39A-216ENST00000530004 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
TTC39A-216ENST00000530004 SCN4AP35499 1836 aa17.06■□□□□ 0.32
TTC39A-216ENST00000530004 E7EWF7 191 aa17.06■□□□□ 0.32
TTC39A-216ENST00000530004 ZNF213O14771 459 aa17.06■□□□□ 0.32
TTC39A-216ENST00000530004 PRKAB2O43741 272 aa17.06■□□□□ 0.32
TTC39A-216ENST00000530004 WDHD1O75717 1129 aaPredicted RBP17.06■□□□□ 0.32
TTC39A-216ENST00000530004 PNMA8AQ86V59 439 aaPredicted RBP17.06■□□□□ 0.32
TTC39A-216ENST00000530004 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
TTC39A-216ENST00000530004 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
TTC39A-216ENST00000530004 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
TTC39A-216ENST00000530004 DDIT3P35638 169 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 CACNB3P54284 484 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 ALX1Q15699 326 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 SDR42E1Q8WUS8 393 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
TTC39A-216ENST00000530004 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
TTC39A-216ENST00000530004 TMOD2Q9NZR1 351 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
TTC39A-216ENST00000530004 NFIAQ12857 509 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 CUL4AQ13619 759 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 NAPBQ9H115 298 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 CHMP5Q9NZZ3 219 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 ZMYM6O95789 1325 aa17.05■□□□□ 0.32
TTC39A-216ENST00000530004 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
TTC39A-216ENST00000530004 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
TTC39A-216ENST00000530004 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
TTC39A-216ENST00000530004 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
TTC39A-216ENST00000530004 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
TTC39A-216ENST00000530004 VEZTQ9HBM0 779 aa17.04■□□□□ 0.32
TTC39A-216ENST00000530004 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
TTC39A-216ENST00000530004 GGA3Q9NZ52 723 aa17.04■□□□□ 0.32
TTC39A-216ENST00000530004 USP5P45974 858 aa17.03■□□□□ 0.32
TTC39A-216ENST00000530004 ANKRD1Q15327 319 aa17.03■□□□□ 0.32
TTC39A-216ENST00000530004 FKBP1CQ5VVH2 108 aa17.03■□□□□ 0.32
TTC39A-216ENST00000530004 GPBP1L1Q9HC44 474 aaPredicted RBP17.03■□□□□ 0.32
TTC39A-216ENST00000530004 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
TTC39A-216ENST00000530004 ATP8A2Q9NTI2 1148 aa17.03■□□□□ 0.32
TTC39A-216ENST00000530004 FAM198AQ9UFP1 575 aa17.03■□□□□ 0.32
TTC39A-216ENST00000530004 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
TTC39A-216ENST00000530004 FLT1P17948 1338 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
TTC39A-216ENST00000530004 YY1P25490 414 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 TDO2P48775 406 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 PICALMQ13492 652 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.32
TTC39A-216ENST00000530004 MAPKAPK5Q8IW41 473 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.32
TTC39A-216ENST00000530004 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.31
TTC39A-216ENST00000530004 POTEIP0CG38 1075 aa17.02■□□□□ 0.31
TTC39A-216ENST00000530004 POTEJP0CG39 1038 aa17.02■□□□□ 0.31
TTC39A-216ENST00000530004 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.31
TTC39A-216ENST00000530004 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.31
TTC39A-216ENST00000530004 ENTPD3O75355 529 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 TCP10Q12799 353 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 TNFAIP1Q13829 316 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 GIMAP6Q6P9H5 292 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 Q6ZUG5 572 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms