RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 E9PSI1 815 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 RBAK-RBAKDNI3L0D1 243 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 TRIM37O94972 964 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 LRRC14Q15048 493 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 SGO2Q562F6 1265 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 ZC3H12AQ5D1E8 599 aaKnown RBP7.81□□□□□ -1.16
CTR9-204ENST00000529355 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 FBXL19Q6PCT2 694 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 LRFN4Q6PJG9 635 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 HS2ST1Q7LGA3 356 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 DYMQ7RTS9 669 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 FBXO27Q8NI29 283 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 CYP4F12Q9HCS2 524 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 DISC1Q9NRI5 854 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 KRT82Q9NSB4 513 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 FAM105AQ9NUU6 356 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 SAMM50Q9Y512 469 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 ACTL7BQ9Y614 415 aa7.81□□□□□ -1.16
CTR9-204ENST00000529355 F13A1P00488 732 aa7.8□□□□□ -1.16
CTR9-204ENST00000529355 RPS26P62854 115 aaKnown RBP7.8□□□□□ -1.16
CTR9-204ENST00000529355 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
CTR9-204ENST00000529355 NT5DC4Q86YG4 428 aa7.8□□□□□ -1.16
CTR9-204ENST00000529355 LGR6Q9HBX8 967 aa7.8□□□□□ -1.16
CTR9-204ENST00000529355 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
CTR9-204ENST00000529355 CRIM1Q9NZV1 1036 aa7.8□□□□□ -1.16
CTR9-204ENST00000529355 RAD51AP2Q09MP3 1159 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 PPM1JQ5JR12 505 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 ANKRD34AQ69YU3 496 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 USP48Q86UV5 1035 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 GOLM1Q8NBJ4 401 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 FBLIM1Q8WUP2 373 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 FANCD2OSQ96PS1 177 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 BCL11AQ9H165 835 aa7.79□□□□□ -1.16
CTR9-204ENST00000529355 METTL5Q9NRN9 209 aaKnown RBP7.79□□□□□ -1.16
CTR9-204ENST00000529355 FAM221AA4D161 298 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 TLR3O15455 904 aaKnown RBP7.78□□□□□ -1.16
CTR9-204ENST00000529355 SART1O43290 800 aaKnown RBP7.78□□□□□ -1.16
CTR9-204ENST00000529355 COBLO75128 1261 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 NEFMP07197 916 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 BMP3P12645 472 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 ITGAEP38570 1179 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 ID3Q02535 119 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 LMNB2Q03252 620 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 ARTNQ5T4W7 220 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 TRIM42Q8IWZ5 723 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 SHISA5Q8N114 240 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
CTR9-204ENST00000529355 MIR1-1HGQ9H1L0 117 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 DDX41Q9UJV9 622 aaKnown RBP7.78□□□□□ -1.16
CTR9-204ENST00000529355 HIF3AQ9Y2N7 669 aa7.78□□□□□ -1.16
CTR9-204ENST00000529355 DYNC1LI2O43237 492 aaPredicted RBP7.77□□□□□ -1.17
CTR9-204ENST00000529355 SLFN14P0C7P3 912 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 TCF3P15923 654 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 NTF4P34130 210 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 EIF4A3P38919 411 aaKnown RBP7.77□□□□□ -1.17
CTR9-204ENST00000529355 ASPAP45381 313 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 CRKP46108 304 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 TTLL4Q14679 1199 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 UTP4Q969X6 686 aaKnown RBP7.77□□□□□ -1.17
CTR9-204ENST00000529355 MYRFLQ96LU7 910 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 CEP41Q9BYV8 373 aa7.77□□□□□ -1.17
CTR9-204ENST00000529355 GSX1Q9H4S2 264 aaPredicted RBP7.77□□□□□ -1.17
CTR9-204ENST00000529355 GFRA2O00451 464 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
CTR9-204ENST00000529355 RLBP1P12271 317 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 HCLS1P14317 486 aaPredicted RBP7.76□□□□□ -1.17
CTR9-204ENST00000529355 RAB6AP20340 208 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 LMNB1P20700 586 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 TNNI2P48788 182 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 RING1Q06587 406 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
CTR9-204ENST00000529355 WIPI1Q5MNZ9 446 aaPredicted RBP7.76□□□□□ -1.17
CTR9-204ENST00000529355 SNAP47Q5SQN1 464 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.76□□□□□ -1.17
CTR9-204ENST00000529355 FAM20CQ8IXL6 584 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
CTR9-204ENST00000529355 UBP1Q9NZI7 540 aa7.76□□□□□ -1.17
CTR9-204ENST00000529355 HMX2A2RU54 273 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 PRAMEF27A3QJZ7 478 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 GAS2O43903 313 aaKnown RBP7.75□□□□□ -1.17
CTR9-204ENST00000529355 GREM1O60565 184 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 NFICP08651 508 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 NKAPLQ5M9Q1 402 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
CTR9-204ENST00000529355 ACBD3Q9H3P7 528 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 CORINQ9Y5Q5 1042 aa7.75□□□□□ -1.17
CTR9-204ENST00000529355 CILPO75339 1184 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 MAP4P27816 1152 aaKnown RBP7.74□□□□□ -1.17
CTR9-204ENST00000529355 USP11P51784 963 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 HP1BP3Q5SSJ5 553 aaPredicted RBP7.74□□□□□ -1.17
CTR9-204ENST00000529355 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 GATAD2BQ8WXI9 593 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 KCNF1Q9H3M0 494 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 ACSS3Q9H6R3 686 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 KCNQ5Q9NR82 932 aa7.74□□□□□ -1.17
CTR9-204ENST00000529355 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.74□□□□□ -1.17
CTR9-204ENST00000529355 POLR3KQ9Y2Y1 108 aaPredicted RBP7.74□□□□□ -1.17
CTR9-204ENST00000529355 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms