RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PHF20L1A8MW92 1017 aa23.85■■□□□ 1.41
SSRP1-204ENST00000529002 PRRT2Q7Z6L0 340 aaPredicted RBP23.85■■□□□ 1.41
SSRP1-204ENST00000529002 CCDC84Q86UT8 332 aaPredicted RBP23.85■■□□□ 1.41
SSRP1-204ENST00000529002 C7orf61Q8IZ16 206 aa23.85■■□□□ 1.41
SSRP1-204ENST00000529002 PAK6Q9NQU5 681 aaPredicted RBP23.85■■□□□ 1.41
SSRP1-204ENST00000529002 USP40Q9NVE5 1235 aa23.85■■□□□ 1.41
SSRP1-204ENST00000529002 DOCK1Q14185 1865 aa23.85■■□□□ 1.41
SSRP1-204ENST00000529002 UTYO14607 1347 aa23.84■■□□□ 1.41
SSRP1-204ENST00000529002 ATRNL1Q5VV63 1379 aa23.84■■□□□ 1.41
SSRP1-204ENST00000529002 IFIT1P09914 478 aaKnown RBP23.84■■□□□ 1.41
SSRP1-204ENST00000529002 PTPRAP18433 802 aa23.84■■□□□ 1.41
SSRP1-204ENST00000529002 GDF15Q99988 308 aa23.84■■□□□ 1.41
SSRP1-204ENST00000529002 CRISPLD2Q9H0B8 497 aa23.84■■□□□ 1.41
SSRP1-204ENST00000529002 PUM3Q15397 648 aaKnown RBP23.83■■□□□ 1.41
SSRP1-204ENST00000529002 WDR63Q8IWG1 891 aa23.83■■□□□ 1.41
SSRP1-204ENST00000529002 SCYL3Q8IZE3 742 aa23.83■■□□□ 1.41
SSRP1-204ENST00000529002 WDR66Q8TBY9 1149 aa23.83■■□□□ 1.41
SSRP1-204ENST00000529002 PXYLP1Q8TE99 480 aa23.83■■□□□ 1.41
SSRP1-204ENST00000529002 AFG3L2Q9Y4W6 797 aa23.83■■□□□ 1.41
SSRP1-204ENST00000529002 SYN1P17600 705 aa23.82■■□□□ 1.4
SSRP1-204ENST00000529002 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
SSRP1-204ENST00000529002 SH3BP5LQ7L8J4 393 aa23.82■■□□□ 1.4
SSRP1-204ENST00000529002 FASTKD5Q7L8L6 764 aaKnown RBP23.82■■□□□ 1.4
SSRP1-204ENST00000529002 DEFB123Q8N688 67 aa23.82■■□□□ 1.4
SSRP1-204ENST00000529002 ANKRD13CQ8N6S4 541 aa23.82■■□□□ 1.4
SSRP1-204ENST00000529002 DDX60LQ5H9U9 1706 aaKnown RBP23.81■■□□□ 1.4
SSRP1-204ENST00000529002 IRF5Q13568 498 aa23.81■■□□□ 1.4
SSRP1-204ENST00000529002 PICK1Q9NRD5 415 aa23.81■■□□□ 1.4
SSRP1-204ENST00000529002 RGS3P49796 1198 aa23.8■■□□□ 1.4
SSRP1-204ENST00000529002 MNX1P50219 401 aaPredicted RBP23.8■■□□□ 1.4
SSRP1-204ENST00000529002 TRIM32Q13049 653 aa23.8■■□□□ 1.4
SSRP1-204ENST00000529002 NECAB2Q7Z6G3 386 aa23.8■■□□□ 1.4
SSRP1-204ENST00000529002 SMCR8Q8TEV9 937 aaPredicted RBP23.8■■□□□ 1.4
SSRP1-204ENST00000529002 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.8■■□□□ 1.4
SSRP1-204ENST00000529002 TRIM75PA6NK02 468 aa23.79■■□□□ 1.4
SSRP1-204ENST00000529002 SLC5A1P13866 664 aa23.79■■□□□ 1.4
SSRP1-204ENST00000529002 KIF16BQ96L93 1317 aa23.79■■□□□ 1.4
SSRP1-204ENST00000529002 PLXNB2O15031 1838 aa23.78■■□□□ 1.4
SSRP1-204ENST00000529002 DDTLA6NHG4 134 aaPredicted RBP23.78■■□□□ 1.4
SSRP1-204ENST00000529002 BMP8BP34820 402 aa23.78■■□□□ 1.4
SSRP1-204ENST00000529002 TREML2Q5T2D2 321 aa23.78■■□□□ 1.4
SSRP1-204ENST00000529002 LDHBP07195 334 aaKnown RBP23.77■■□□□ 1.4
SSRP1-204ENST00000529002 RFX5P48382 616 aaPredicted RBP23.77■■□□□ 1.4
SSRP1-204ENST00000529002 NCBP3Q53F19 620 aaKnown RBP23.77■■□□□ 1.4
SSRP1-204ENST00000529002 COA7Q96BR5 231 aa23.77■■□□□ 1.4
SSRP1-204ENST00000529002 EYA2O00167 538 aa23.76■■□□□ 1.39
SSRP1-204ENST00000529002 MAGEA10P43363 369 aaPredicted RBP23.76■■□□□ 1.39
SSRP1-204ENST00000529002 ZSCAN29Q8IWY8 852 aaPredicted RBP23.76■■□□□ 1.39
SSRP1-204ENST00000529002 LPIN2Q92539 896 aa23.76■■□□□ 1.39
SSRP1-204ENST00000529002 DDX4Q9NQI0 724 aaKnown RBP23.76■■□□□ 1.39
SSRP1-204ENST00000529002 SLC45A1Q9Y2W3 748 aa23.76■■□□□ 1.39
SSRP1-204ENST00000529002 LRRFIP2Q9Y608 721 aaKnown RBP23.76■■□□□ 1.39
SSRP1-204ENST00000529002 ATAD5Q96QE3 1844 aa23.75■■□□□ 1.39
SSRP1-204ENST00000529002 ATG9AQ7Z3C6 839 aa23.75■■□□□ 1.39
SSRP1-204ENST00000529002 MTMR10Q9NXD2 777 aa23.75■■□□□ 1.39
SSRP1-204ENST00000529002 FAM196BA6NMK8 535 aa23.74■■□□□ 1.39
SSRP1-204ENST00000529002 USP44Q9H0E7 712 aa23.74■■□□□ 1.39
SSRP1-204ENST00000529002 AGTPBP1Q9UPW5 1226 aa23.74■■□□□ 1.39
SSRP1-204ENST00000529002 ENTPD3O75355 529 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 PHKA1P46020 1223 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 PICALMQ13492 652 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 IDI2Q9BXS1 227 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 STXBP5LQ9Y2K9 1186 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 RFX7Q2KHR2 1363 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 LOC285556D6RIA3 1793 aa23.73■■□□□ 1.39
SSRP1-204ENST00000529002 MAP3K10Q02779 954 aa23.72■■□□□ 1.39
SSRP1-204ENST00000529002 SIL1Q9H173 461 aa23.72■■□□□ 1.39
SSRP1-204ENST00000529002 GJD2Q9UKL4 321 aa23.72■■□□□ 1.39
SSRP1-204ENST00000529002 CTNND1O60716 968 aaKnown RBP23.71■■□□□ 1.39
SSRP1-204ENST00000529002 HMGCRP04035 888 aa23.71■■□□□ 1.39
SSRP1-204ENST00000529002 FAM110CQ1W6H9 321 aa23.71■■□□□ 1.39
SSRP1-204ENST00000529002 LRIT3Q3SXY7 679 aa23.71■■□□□ 1.39
SSRP1-204ENST00000529002 GPR153Q6NV75 609 aa23.71■■□□□ 1.39
SSRP1-204ENST00000529002 COL25A1Q9BXS0 654 aaPredicted RBP23.71■■□□□ 1.39
SSRP1-204ENST00000529002 NBPF3Q9H094 633 aa23.71■■□□□ 1.39
SSRP1-204ENST00000529002 PEX10O60683 326 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 CAPN2P17655 700 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 ATP2B3Q16720 1220 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 TDHQ8IZJ6 230 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 MRPL50Q8N5N7 158 aaKnown RBP23.7■■□□□ 1.38
SSRP1-204ENST00000529002 ANKLE1Q8NAG6 615 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 C11orf49Q9H6J7 331 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
SSRP1-204ENST00000529002 GAKO14976 1311 aa23.69■■□□□ 1.38
SSRP1-204ENST00000529002 RPTORQ8N122 1335 aa23.69■■□□□ 1.38
SSRP1-204ENST00000529002 SALL1Q9NSC2 1324 aa23.69■■□□□ 1.38
SSRP1-204ENST00000529002 ADORA1P30542 326 aa23.69■■□□□ 1.38
SSRP1-204ENST00000529002 UBE2OQ9C0C9 1292 aaKnown RBP23.69■■□□□ 1.38
SSRP1-204ENST00000529002 HMX1Q9NP08 348 aaPredicted RBP23.69■■□□□ 1.38
SSRP1-204ENST00000529002 UNC80Q8N2C7 3258 aa23.68■■□□□ 1.38
SSRP1-204ENST00000529002 PFASO15067 1338 aa23.68■■□□□ 1.38
SSRP1-204ENST00000529002 SPP2Q13103 211 aa23.68■■□□□ 1.38
SSRP1-204ENST00000529002 TRIB2Q92519 343 aa23.68■■□□□ 1.38
SSRP1-204ENST00000529002 DENND2AQ9ULE3 1009 aa23.68■■□□□ 1.38
SSRP1-204ENST00000529002 HMGCS2P54868 508 aa23.67■■□□□ 1.38
SSRP1-204ENST00000529002 RRP1BQ14684 758 aaKnown RBP23.67■■□□□ 1.38
SSRP1-204ENST00000529002 GNL3LQ9NVN8 582 aaKnown RBP23.67■■□□□ 1.38
SSRP1-204ENST00000529002 CYP2B6P20813 491 aa23.66■■□□□ 1.38
SSRP1-204ENST00000529002 BTDP43251 543 aa23.66■■□□□ 1.38
SSRP1-204ENST00000529002 ABCF2Q9UG63 623 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms