RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 C4AP0C0L4 1744 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 SALL1Q9NSC2 1324 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 SH2B2O14492 632 aaPredicted RBP9.6□□□□□ -0.87
SOX6-210ENST00000528252 FDPSP14324 419 aaKnown RBP9.6□□□□□ -0.87
SOX6-210ENST00000528252 PRDX5P30044 214 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 ST5P78524 1137 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 GUCY1B3Q02153 619 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 DDR1Q08345 913 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 MFSD6Q6ZSS7 791 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 CHMP4CQ96CF2 233 aa9.6□□□□□ -0.87
SOX6-210ENST00000528252 MINDY4BA8MYZ0 360 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 CPLX1O14810 134 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 DHX16O60231 1041 aaKnown RBP9.59□□□□□ -0.87
SOX6-210ENST00000528252 RXRAP19793 462 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 MECOMQ03112 1051 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 RESTQ13127 1097 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 IGDCC4Q8TDY8 1250 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 SYAP1Q96A49 352 aaPredicted RBP9.59□□□□□ -0.87
SOX6-210ENST00000528252 NSUN4Q96CB9 384 aaKnown RBP9.59□□□□□ -0.87
SOX6-210ENST00000528252 GPR101Q96P66 508 aaPredicted RBP9.59□□□□□ -0.87
SOX6-210ENST00000528252 DOCK2Q92608 1830 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 SMIM22K7EJ46 135 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
SOX6-210ENST00000528252 CRY2Q49AN0 593 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 TMEM67Q5HYA8 995 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 CNNM2Q9H8M5 875 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 LEMD3Q9Y2U8 911 aa9.59□□□□□ -0.87
SOX6-210ENST00000528252 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 IFIT3O14879 490 aaKnown RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 APBA3O96018 575 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 ZNF772Q68DY9 489 aaPredicted RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 APOA5Q6Q788 366 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 LRSAM1Q6UWE0 723 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 NFXL1Q6ZNB6 911 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 ORC3Q9UBD5 711 aaPredicted RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 XDHP47989 1333 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 IRS2Q9Y4H2 1338 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 POLRMTO00411 1230 aaKnown RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 PPARAQ07869 468 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 ZNF827Q17R98 1081 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 OTUD7BQ6GQQ9 843 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 MICU3Q86XE3 530 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 CCDC144CPQ8IYA2 1237 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 STAG1Q8WVM7 1258 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 SPATA32Q96LK8 384 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 ZKSCAN3Q9BRR0 538 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 KRT23Q9C075 422 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 SCAND2PQ9GZW5 306 aaPredicted RBP9.58□□□□□ -0.88
SOX6-210ENST00000528252 LY9Q9HBG7 655 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 BRWD3Q6RI45 1802 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 CASZ1Q86V15 1759 aa9.58□□□□□ -0.88
SOX6-210ENST00000528252 CYP2D7A0A087X1C5 515 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 METAP2P50579 478 aaKnown RBP eCLIP9.57□□□□□ -0.88
SOX6-210ENST00000528252 IRX3P78415 501 aaPredicted RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 GPSM2P81274 684 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 LEO1Q8WVC0 666 aaPredicted RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 SECISBP2LQ93073 1101 aaKnown RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 MYL10Q9BUA6 226 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 AATFQ9NY61 560 aaKnown RBP eCLIP9.57□□□□□ -0.88
SOX6-210ENST00000528252 PDS5AQ29RF7 1337 aaKnown RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 ZBTB43O43298 467 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 CEBPZQ03701 1054 aaKnown RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 RNF41Q9H4P4 317 aaPredicted RBP9.57□□□□□ -0.88
SOX6-210ENST00000528252 GJB4Q9NTQ9 266 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 A0A1B0GUL6 1792 aa9.57□□□□□ -0.88
SOX6-210ENST00000528252 PLSCR1O15162 318 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 UFL1O94874 794 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 CDC27P30260 824 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 LIFRP42702 1097 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 NOLC1Q14978 699 aaKnown RBP eCLIP9.56□□□□□ -0.88
SOX6-210ENST00000528252 CCDC183Q5T5S1 534 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 SGMS1Q86VZ5 419 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 ELP1O95163 1332 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 GOLGA6L4A6NEF3 574 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 USP17L21D6R901 530 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
SOX6-210ENST00000528252 DZIP1Q86YF9 867 aaKnown RBP9.56□□□□□ -0.88
SOX6-210ENST00000528252 TDRD7Q8NHU6 1098 aaKnown RBP9.56□□□□□ -0.88
SOX6-210ENST00000528252 ZBTB9Q96C00 473 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 C8orf76Q96K31 380 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 BRIP1Q9BX63 1249 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 SLC12A7Q9Y666 1083 aa9.56□□□□□ -0.88
SOX6-210ENST00000528252 CACNA1SQ13698 1873 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 CCDC69A6NI79 296 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 GOLGA8AA7E2F4 631 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 BBOX1O75936 387 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
SOX6-210ENST00000528252 SART3Q15020 963 aaKnown RBP9.55□□□□□ -0.88
SOX6-210ENST00000528252 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
SOX6-210ENST00000528252 ZNF804AQ7Z570 1209 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 TEX2Q8IWB9 1127 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 FBXO18Q8NFZ0 1043 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 WDR66Q8TBY9 1149 aa9.55□□□□□ -0.88
SOX6-210ENST00000528252 PIBF1Q8WXW3 757 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms