RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 NECAB1Q8N987 351 aa23.49■■□□□ 1.35
PPP1CA-204ENST00000526510 NOL10Q9BSC4 688 aaKnown RBP23.49■■□□□ 1.35
PPP1CA-204ENST00000526510 WDR19Q8NEZ3 1342 aa23.48■■□□□ 1.35
PPP1CA-204ENST00000526510 TRDNQ13061 729 aa23.48■■□□□ 1.35
PPP1CA-204ENST00000526510 CCDC83Q8IWF9 413 aa23.48■■□□□ 1.35
PPP1CA-204ENST00000526510 CWC22Q9HCG8 908 aaKnown RBP23.48■■□□□ 1.35
PPP1CA-204ENST00000526510 STK11IPQ8N1F8 1099 aa23.48■■□□□ 1.35
PPP1CA-204ENST00000526510 NLGN2Q8NFZ4 835 aa23.48■■□□□ 1.35
PPP1CA-204ENST00000526510 CYP2D6P10635 497 aa23.47■■□□□ 1.35
PPP1CA-204ENST00000526510 SCNN1DP51172 638 aa23.47■■□□□ 1.35
PPP1CA-204ENST00000526510 APOBRQ0VD83 1088 aa23.47■■□□□ 1.35
PPP1CA-204ENST00000526510 SBK1Q52WX2 424 aa23.47■■□□□ 1.35
PPP1CA-204ENST00000526510 MFSD6Q6ZSS7 791 aa23.47■■□□□ 1.35
PPP1CA-204ENST00000526510 USP17L8P0C7I0 530 aa23.46■■□□□ 1.35
PPP1CA-204ENST00000526510 USP5P45974 858 aa23.46■■□□□ 1.35
PPP1CA-204ENST00000526510 FGD1P98174 961 aa23.46■■□□□ 1.35
PPP1CA-204ENST00000526510 CERS3Q8IU89 383 aa23.46■■□□□ 1.35
PPP1CA-204ENST00000526510 LARGE2Q8N3Y3 721 aa23.46■■□□□ 1.35
PPP1CA-204ENST00000526510 TGFBRAP1Q8WUH2 860 aa23.46■■□□□ 1.35
PPP1CA-204ENST00000526510 VPS33BQ9H267 617 aa23.45■■□□□ 1.34
PPP1CA-204ENST00000526510 CNNM2Q9H8M5 875 aa23.45■■□□□ 1.34
PPP1CA-204ENST00000526510 KDM4AO75164 1064 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 STK3Q13188 491 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 HHIPL2Q6UWX4 724 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 KIAA0825Q8IV33 1275 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 TEX11Q8IYF3 940 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 KRT23Q9C075 422 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 SPON1Q9HCB6 807 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 MCM9Q9NXL9 1143 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 ZSWIM5Q9P217 1185 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 ARPP21Q9UBL0 812 aaPredicted RBP23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 NFKBIEO00221 500 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 DTNBO60941 627 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 FGRP09769 529 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 PLCG2P16885 1265 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 IARSP41252 1262 aaKnown RBP23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 EVCP57679 992 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 MAPKAPK5Q8IW41 473 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 RNF41Q9H4P4 317 aaPredicted RBP23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 BCS1LQ9Y276 419 aa23.44■■□□□ 1.34
PPP1CA-204ENST00000526510 PKP1Q13835 747 aa23.43■■□□□ 1.34
PPP1CA-204ENST00000526510 RRP12Q5JTH9 1297 aaKnown RBP23.43■■□□□ 1.34
PPP1CA-204ENST00000526510 CRKP46108 304 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 RAB3GAP1Q15042 981 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 C12orf60Q5U649 245 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 IGDCC4Q8TDY8 1250 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 GTF3C6Q969F1 213 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 TEKT1Q969V4 418 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 MRIQ9BWK5 157 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 BRPF3Q9ULD4 1205 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 PCDHAC2Q9Y5I4 1007 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 FLT1P17948 1338 aa23.42■■□□□ 1.34
PPP1CA-204ENST00000526510 SH2B2O14492 632 aaPredicted RBP23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 PFKFB2O60825 505 aa23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 SLC4A8Q2Y0W8 1093 aa23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 APOBEC3HQ6NTF7 200 aaKnown RBP23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 TAOK3Q9H2K8 898 aa23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 SENP2Q9HC62 589 aa23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 PDIA3P30101 505 aaKnown RBP23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 ZNF274Q96GC6 653 aaPredicted RBP23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 TOMM22Q9NS69 142 aa23.41■■□□□ 1.34
PPP1CA-204ENST00000526510 RAD17O75943 681 aa23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 HDLBPQ00341 1268 aaKnown RBP23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 SCRN1Q12765 414 aa23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 TMEM87BQ96K49 555 aa23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 ZDHHC15Q96MV8 337 aa23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 SAP30BPQ9UHR5 308 aaKnown RBP23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 ANGEL1Q9UNK9 670 aaKnown RBP23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 MYH8P13535 1937 aa23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 ROBO3Q96MS0 1386 aa23.4■■□□□ 1.34
PPP1CA-204ENST00000526510 PSMD14O00487 310 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 PRDM1O75626 825 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 VIL1P09327 827 aaKnown RBP23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 LY9Q9HBG7 655 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 ZNRF3Q9ULT6 936 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 SMC3Q9UQE7 1217 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 ZDHHC9Q9Y397 364 aa23.39■■□□□ 1.34
PPP1CA-204ENST00000526510 WDHD1O75717 1129 aaPredicted RBP23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 PCP11498 1178 aaKnown RBP23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 PLCD1P51178 756 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 RSBN1LQ6PCB5 846 aaPredicted RBP23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 NIM1KQ8IY84 436 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 USP40Q9NVE5 1235 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 KLF18A0A0U1RQI7 1052 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 ORC4O43929 436 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 GJB2P29033 226 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 TNPO1Q92973 898 aaKnown RBP23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 GMLQ99445 158 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 ZKSCAN3Q9BRR0 538 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 DDX4Q9NQI0 724 aaKnown RBP23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 HPS5Q9UPZ3 1129 aa23.38■■□□□ 1.33
PPP1CA-204ENST00000526510 PRELPP51888 382 aa23.37■■□□□ 1.33
PPP1CA-204ENST00000526510 NUCB2P80303 420 aa23.37■■□□□ 1.33
PPP1CA-204ENST00000526510 NFKBIBQ15653 356 aa23.37■■□□□ 1.33
PPP1CA-204ENST00000526510 TMEM67Q5HYA8 995 aa23.37■■□□□ 1.33
PPP1CA-204ENST00000526510 ESR2Q92731 530 aa23.37■■□□□ 1.33
PPP1CA-204ENST00000526510 DYNLL2Q96FJ2 89 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms