RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 C21orf2O43822 256 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 NOGQ13253 232 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 MTFR1Q15390 333 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 CST9Q5W186 159 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 RIPOR1Q6ZS17 1223 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
NEDD8-203ENST00000524927 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 EGFL7Q9UHF1 273 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 LTBP3Q9NS15 1303 aa10.02□□□□□ -0.81
NEDD8-203ENST00000524927 H3BRB1 525 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 CDK2AP1O14519 115 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 THBS1P07996 1170 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 CENPCQ03188 943 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 SAPCD2Q86UD0 394 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 GLYCTKQ8IVS8 523 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 COL26A1Q96A83 441 aa10.01□□□□□ -0.81
NEDD8-203ENST00000524927 TUT1Q9H6E5 874 aaKnown RBP10.01□□□□□ -0.81
NEDD8-203ENST00000524927 MAP2P11137 1827 aaKnown RBP10□□□□□ -0.81
NEDD8-203ENST00000524927 CEP290O15078 2479 aa10□□□□□ -0.81
NEDD8-203ENST00000524927 SMG6Q86US8 1419 aaKnown RBP10□□□□□ -0.81
NEDD8-203ENST00000524927 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
NEDD8-203ENST00000524927 RFC4P35249 363 aa10□□□□□ -0.81
NEDD8-203ENST00000524927 PSMA6P60900 246 aaKnown RBP10□□□□□ -0.81
NEDD8-203ENST00000524927 DDR1Q08345 913 aa10□□□□□ -0.81
NEDD8-203ENST00000524927 ITPK1Q13572 414 aa10□□□□□ -0.81
NEDD8-203ENST00000524927 GAS2L1Q99501 681 aaPredicted RBP10□□□□□ -0.81
NEDD8-203ENST00000524927 TTC21BQ7Z4L5 1316 aa10□□□□□ -0.81
NEDD8-203ENST00000524927 TTC21AQ8NDW8 1320 aa10□□□□□ -0.81
NEDD8-203ENST00000524927 ICMTO60725 284 aa9.99□□□□□ -0.81
NEDD8-203ENST00000524927 GRIP2Q9C0E4 1043 aa9.99□□□□□ -0.81
NEDD8-203ENST00000524927 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
NEDD8-203ENST00000524927 HRH3Q9Y5N1 445 aa9.99□□□□□ -0.81
NEDD8-203ENST00000524927 CGNL1Q0VF96 1302 aa9.99□□□□□ -0.81
NEDD8-203ENST00000524927 FAM208AQ9UK61 1670 aaKnown RBP9.99□□□□□ -0.81
NEDD8-203ENST00000524927 CACNA1AO00555 2505 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 BCRP11274 1271 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 ITGAEP38570 1179 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 PLA2G5P39877 138 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
NEDD8-203ENST00000524927 FOXD4L4Q8WXT5 416 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-203ENST00000524927 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-203ENST00000524927 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 C2orf49Q9BVC5 232 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-203ENST00000524927 TAOK3Q9H2K8 898 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 ZNF232Q9UNY5 417 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 DYRK1BQ9Y463 629 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 USP3Q9Y6I4 520 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 UNC80Q8N2C7 3258 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 DLEC1Q9Y238 1755 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 TRPM7Q96QT4 1865 aa9.98□□□□□ -0.81
NEDD8-203ENST00000524927 GPC1P35052 558 aa9.97□□□□□ -0.81
NEDD8-203ENST00000524927 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.81
NEDD8-203ENST00000524927 MTMR3Q13615 1198 aa9.97□□□□□ -0.81
NEDD8-203ENST00000524927 TMEM214Q6NUQ4 689 aaKnown RBP9.97□□□□□ -0.81
NEDD8-203ENST00000524927 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
NEDD8-203ENST00000524927 FER1L6Q2WGJ9 1857 aa9.96□□□□□ -0.81
NEDD8-203ENST00000524927 SERTM1A2A2V5 107 aa9.96□□□□□ -0.82
NEDD8-203ENST00000524927 PROCP04070 461 aa9.96□□□□□ -0.82
NEDD8-203ENST00000524927 C16orf46Q6P387 395 aa9.96□□□□□ -0.82
NEDD8-203ENST00000524927 NBPF10Q6P3W6 841 aaKnown RBP9.96□□□□□ -0.82
NEDD8-203ENST00000524927 PIGBQ92521 554 aa9.96□□□□□ -0.82
NEDD8-203ENST00000524927 IQSEC3Q9UPP2 1182 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-203ENST00000524927 USP31Q70CQ4 1352 aa9.96□□□□□ -0.82
NEDD8-203ENST00000524927 RANBP2P49792 3224 aaKnown RBP9.96□□□□□ -0.82
NEDD8-203ENST00000524927 POLRMTO00411 1230 aaKnown RBP9.95□□□□□ -0.82
NEDD8-203ENST00000524927 SNRPNP63162 240 aaKnown RBP9.95□□□□□ -0.82
NEDD8-203ENST00000524927 C1orf229Q6ZS94 237 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-203ENST00000524927 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
NEDD8-203ENST00000524927 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
NEDD8-203ENST00000524927 GMCL1Q96IK5 515 aa9.95□□□□□ -0.82
NEDD8-203ENST00000524927 ENAMQ9NRM1 1142 aa9.95□□□□□ -0.82
NEDD8-203ENST00000524927 RNF186Q9NXI6 227 aa9.95□□□□□ -0.82
NEDD8-203ENST00000524927 LTN1O94822 1766 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 MAP3K19Q56UN5 1328 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 PCDH11XQ9BZA7 1347 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 PCDH11YQ9BZA8 1340 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 ADAM23O75077 832 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 TM4SF1P30408 202 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 NOS2P35228 1153 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 TEAD4Q15561 434 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 XP32Q5T750 250 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 FBXO46Q6PJ61 603 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-203ENST00000524927 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
NEDD8-203ENST00000524927 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 NIFKQ9BYG3 293 aaKnown RBP9.94□□□□□ -0.82
NEDD8-203ENST00000524927 SAP130Q9H0E3 1048 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 HCN4Q9Y3Q4 1203 aa9.94□□□□□ -0.82
NEDD8-203ENST00000524927 CD163L1Q9NR16 1453 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 RNF123Q5XPI4 1314 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 H0YIN7 160 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 TRAF5O00463 557 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 MSTNO14793 375 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 TRPA1O75762 1119 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 GNASQ5JWF2 1037 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 INTS3Q68E01 1043 aaKnown RBP9.93□□□□□ -0.82
NEDD8-203ENST00000524927 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
NEDD8-203ENST00000524927 BEND7Q8N7W2 519 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms