RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 GLIS2Q9BZE0 524 aaPredicted RBP9.37□□□□□ -0.91
NPAS4-202ENST00000524617 OSBPL5Q9H0X9 879 aaPredicted RBP9.37□□□□□ -0.91
NPAS4-202ENST00000524617 DEFB129Q9H1M3 183 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 VEZTQ9HBM0 779 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 PAPPA2Q9BXP8 1791 aa9.37□□□□□ -0.91
NPAS4-202ENST00000524617 CDK5RAP2Q96SN8 1893 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 FOXP2O15409 715 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 GNAT2P19087 354 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 RASA3Q14644 834 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 MCMDC2Q4G0Z9 681 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 SH3BP5LQ7L8J4 393 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 METTL16Q86W50 562 aaKnown RBP9.36□□□□□ -0.91
NPAS4-202ENST00000524617 SEC62Q99442 399 aaKnown RBP9.36□□□□□ -0.91
NPAS4-202ENST00000524617 CRNKL1Q9BZJ0 848 aaKnown RBP9.36□□□□□ -0.91
NPAS4-202ENST00000524617 ARMT1Q9H993 441 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 DCP1AQ9NPI6 582 aaPredicted RBP9.36□□□□□ -0.91
NPAS4-202ENST00000524617 ATP8A2Q9NTI2 1148 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 AK9Q5TCS8 1911 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 NAV1Q8NEY1 1877 aa9.36□□□□□ -0.91
NPAS4-202ENST00000524617 CCDC171Q6TFL3 1326 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 TCP10L2B9ZVM9 353 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 SGSM2O43147 1006 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 ZNF589Q86UQ0 364 aaPredicted RBP9.35□□□□□ -0.91
NPAS4-202ENST00000524617 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 CDCA5Q96FF9 252 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 IL25Q9H293 177 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 DHX36Q9H2U1 1008 aaKnown RBP9.35□□□□□ -0.91
NPAS4-202ENST00000524617 EPB41L4AQ9HCS5 686 aaPredicted RBP9.35□□□□□ -0.91
NPAS4-202ENST00000524617 DIAPH3Q9NSV4 1193 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 SIPA1L1O43166 1804 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 ROBO3Q96MS0 1386 aa9.35□□□□□ -0.91
NPAS4-202ENST00000524617 DDTLA6NHG4 134 aaPredicted RBP9.34□□□□□ -0.91
NPAS4-202ENST00000524617 GSG1L2A8MUP6 293 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 PRKAB2O43741 272 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 CDC45O75419 566 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 USP5P45974 858 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 MFAP1P55081 439 aaKnown RBP9.34□□□□□ -0.91
NPAS4-202ENST00000524617 FKBP1BP68106 108 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 PICALMQ13492 652 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 ALX1Q15699 326 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
NPAS4-202ENST00000524617 CCDC129Q6ZRS4 1044 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 MAPKAPK5Q8IW41 473 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 ZFPM1Q8IX07 1006 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 RUFY2Q8WXA3 655 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 EHD4Q9H223 541 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 ARPP21Q9UBL0 812 aaPredicted RBP9.34□□□□□ -0.91
NPAS4-202ENST00000524617 SCAF8Q9UPN6 1271 aaKnown RBP9.34□□□□□ -0.91
NPAS4-202ENST00000524617 SLC4A4Q9Y6R1 1079 aa9.34□□□□□ -0.91
NPAS4-202ENST00000524617 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
NPAS4-202ENST00000524617 TRAF5O00463 557 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 TBC1D12O60347 775 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 GABPAQ06546 454 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 TCP10Q12799 353 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 SUPT20HL1Q3ZLR7 823 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 SBK1Q52WX2 424 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
NPAS4-202ENST00000524617 VPS53Q5VIR6 699 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 DLK2Q6UY11 383 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 HOOK2Q96ED9 719 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 DSCC1Q9BVC3 393 aa9.33□□□□□ -0.92
NPAS4-202ENST00000524617 LAMB1P07942 1786 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 UNCXA6NJT0 531 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 HSPD1P10809 573 aaKnown RBP9.32□□□□□ -0.92
NPAS4-202ENST00000524617 NF2P35240 595 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
NPAS4-202ENST00000524617 CST9Q5W186 159 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 CTR9Q6PD62 1173 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 IFNL3Q8IZI9 196 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 CSRNP1Q96S65 589 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 ESYT1Q9BSJ8 1104 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 DNAJC18Q9H819 358 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 PI4KBQ9UBF8 816 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 HERC5Q9UII4 1024 aaKnown RBP9.32□□□□□ -0.92
NPAS4-202ENST00000524617 ZNF112Q9UJU3 913 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 TRPM7Q96QT4 1865 aa9.32□□□□□ -0.92
NPAS4-202ENST00000524617 CELF2O95319 508 aaKnown RBP9.31□□□□□ -0.92
NPAS4-202ENST00000524617 HLA-DOAP06340 250 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 HMGB1P09429 215 aaKnown RBP9.31□□□□□ -0.92
NPAS4-202ENST00000524617 APLP1P51693 650 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 DCAF15Q66K64 600 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 TTC6Q86TZ1 520 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.31□□□□□ -0.92
NPAS4-202ENST00000524617 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 NACAP1Q9BZK3 213 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 GBA2Q9HCG7 927 aaPredicted RBP9.31□□□□□ -0.92
NPAS4-202ENST00000524617 MCM9Q9NXL9 1143 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 ANAPC4Q9UJX5 808 aa9.31□□□□□ -0.92
NPAS4-202ENST00000524617 PALD1Q9ULE6 856 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms