RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 PRC1O43663 620 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 FGD1P98174 961 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 GRIPAP1Q4V328 841 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SOGA3Q5TF21 947 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CCDC83Q8IWF9 413 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 TEX11Q8IYF3 940 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 LAMB1P07942 1786 aa17.83■□□□□ 0.44
CSGALNACT1-211ENST00000522854 KDM4AO75164 1064 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 DDIT3P35638 169 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 FAM163AQ96GL9 167 aaPredicted RBP17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SENP2Q9HC62 589 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 HMGB1P09429 215 aaKnown RBP17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CRKP46108 304 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 RBM5P52756 815 aaKnown RBP eCLIP17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CACNB3P54284 484 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 PICALMQ13492 652 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 APOBEC3HQ6NTF7 200 aaKnown RBP17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 MFSD6Q6ZSS7 791 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 RAB11FIP4Q86YS3 637 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SUGT1Q9Y2Z0 365 aa17.82■□□□□ 0.44
CSGALNACT1-211ENST00000522854 TRDNQ13061 729 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CUL4AQ13619 759 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 PKP1Q13835 747 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 NIM1KQ8IY84 436 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 TEKT1Q969V4 418 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ZSWIM5Q9P217 1185 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ARFGEF1Q9Y6D6 1849 aa17.81■□□□□ 0.44
CSGALNACT1-211ENST00000522854 MCM5P33992 734 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 PLCD1P51178 756 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SLF2Q8IX21 1173 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 STAG1Q8WVM7 1258 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ZNRF3Q9ULT6 936 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 FLT1P17948 1338 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CXCL9Q07325 125 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 TMED8Q6PL24 325 aaPredicted RBP17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 FOCADQ5VW36 1801 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 MYH1P12882 1939 aa17.8■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SHTN1A0MZ66 631 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 NFIAQ12857 509 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 GIMAP6Q6P9H5 292 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SLC44A5Q8NCS7 719 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ALDH8A1Q9H2A2 487 aaPredicted RBP17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ANAPC4Q9UJX5 808 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SLURP2P0DP57 97 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 RSBN1LQ6PCB5 846 aaPredicted RBP17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 HHIPL2Q6UWX4 724 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
CSGALNACT1-211ENST00000522854 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
CSGALNACT1-211ENST00000522854 CCT2P78371 535 aaKnown RBP17.78■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ANKRD1Q15327 319 aa17.78■□□□□ 0.44
CSGALNACT1-211ENST00000522854 AGXT2Q9BYV1 514 aa17.78■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
CSGALNACT1-211ENST00000522854 IGSF3O75054 1194 aa17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 FKBP1AP62942 108 aaKnown RBP17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 C12orf60Q5U649 245 aa17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ZFPM1Q8IX07 1006 aa17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 ZDHHC15Q96MV8 337 aa17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 NCOA5Q9HCD5 579 aaKnown RBP17.77■□□□□ 0.44
CSGALNACT1-211ENST00000522854 RANBP6O60518 1105 aaKnown RBP17.77■□□□□ 0.43
CSGALNACT1-211ENST00000522854 POLR3DP05423 398 aaPredicted RBP17.77■□□□□ 0.43
CSGALNACT1-211ENST00000522854 RXRAP19793 462 aa17.77■□□□□ 0.43
CSGALNACT1-211ENST00000522854 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.43
CSGALNACT1-211ENST00000522854 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.43
CSGALNACT1-211ENST00000522854 NMT2O60551 498 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 PLCG2P16885 1265 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SCRN1Q12765 414 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 GMLQ99445 158 aa17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 TDRD3Q9H7E2 651 aaKnown RBP17.76■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SH2B2O14492 632 aaPredicted RBP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 TCP10Q12799 353 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 KRT23Q9C075 422 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 VPS33BQ9H267 617 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CNNM2Q9H8M5 875 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 PDIA3P30101 505 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms