RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 KCNQ3O43525 872 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 GIGYF1O75420 1035 aaPredicted RBP15.63■□□□□ 0.09
SYNPO-205ENST00000522122 UBXN1Q04323 297 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 CNGA4Q8IV77 575 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 PAF1Q8N7H5 531 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 CABP5Q9NP86 173 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 ANGEL1Q9UNK9 670 aaKnown RBP15.63■□□□□ 0.09
SYNPO-205ENST00000522122 LUC7L2Q9Y383 392 aaKnown RBP15.63■□□□□ 0.09
SYNPO-205ENST00000522122 B4E1Z4 1266 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 TUBBP07437 444 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 FAM89AQ96GI7 184 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 SETDB2Q96T68 719 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 C6orf50Q9HD87 102 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 GUCA1BQ9UMX6 200 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 MBD4O95243 580 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 RFC4P35249 363 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 SPTLC3Q9NUV7 552 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 FANCCQ00597 558 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 MCM7P33993 719 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 GIMAP7Q8NHV1 300 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 KCNH3Q9ULD8 1083 aa15.62■□□□□ 0.09
SYNPO-205ENST00000522122 IVLP07476 585 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 PPP4R3AQ6IN85 833 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 DTHD1Q6ZMT9 781 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 MCM9Q9NXL9 1143 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 PUF60Q9UHX1 559 aaKnown RBP15.61■□□□□ 0.09
SYNPO-205ENST00000522122 AKR1B15C9JRZ8 316 aaPredicted RBP15.61■□□□□ 0.09
SYNPO-205ENST00000522122 SF3B2Q13435 895 aaKnown RBP15.61■□□□□ 0.09
SYNPO-205ENST00000522122 OTUD7BQ6GQQ9 843 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 ZKSCAN3Q9BRR0 538 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 NECTIN1Q15223 517 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 ZNF274Q96GC6 653 aaPredicted RBP15.61■□□□□ 0.09
SYNPO-205ENST00000522122 SLC52A2Q9HAB3 445 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 KIAA0753Q2KHM9 967 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 KRT79Q5XKE5 535 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 ADALQ6DHV7 355 aa15.61■□□□□ 0.09
SYNPO-205ENST00000522122 TRMT1LQ7Z2T5 733 aaKnown RBP15.61■□□□□ 0.09
SYNPO-205ENST00000522122 NRKQ7Z2Y5 1582 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 E7EWF7 191 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 GPAA1O43292 621 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 IGSF3O75054 1194 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 TAF5LO75529 589 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 CCDC91Q7Z6B0 441 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 INCENPQ9NQS7 918 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 CAPN2P17655 700 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 XAGE2Q96GT9 111 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 ZNF202O95125 648 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 DEXIO95424 95 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 HOOK3Q86VS8 718 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 HAUS7Q99871 368 aa15.6■□□□□ 0.09
SYNPO-205ENST00000522122 VWA3AA6NCI4 1184 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 EVCP57679 992 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 ACSBG1Q96GR2 724 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 SELENOOQ9BVL4 669 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 GOLGA6L10A0A0M3HER8 536 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 OPA1O60313 960 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 LTKP29376 864 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 RBM28Q9NW13 759 aaKnown RBP15.59■□□□□ 0.09
SYNPO-205ENST00000522122 GNA11P29992 359 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 IFT172Q9UG01 1749 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 RSPH14Q9UHP6 348 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 NDUFB9Q9Y6M9 179 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 PCDH11XQ9BZA7 1347 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 PCDH11YQ9BZA8 1340 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 SCRN1Q12765 414 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 USP28Q96RU2 1077 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 CPS1P31327 1500 aa15.59■□□□□ 0.09
SYNPO-205ENST00000522122 CUTAO60888 179 aa15.58■□□□□ 0.09
SYNPO-205ENST00000522122 RHOXF2BP0C7M4 288 aa15.58■□□□□ 0.09
SYNPO-205ENST00000522122 DIS3L2Q8IYB7 885 aaKnown RBP15.58■□□□□ 0.09
SYNPO-205ENST00000522122 ZNF594Q96JF6 807 aaPredicted RBP15.58■□□□□ 0.09
SYNPO-205ENST00000522122 RHOXF2Q9BQY4 288 aa15.58■□□□□ 0.09
SYNPO-205ENST00000522122 NRBP1Q9UHY1 535 aa15.58■□□□□ 0.09
SYNPO-205ENST00000522122 SAMM50Q9Y512 469 aa15.58■□□□□ 0.09
SYNPO-205ENST00000522122 PREX1Q8TCU6 1659 aa15.58■□□□□ 0.09
SYNPO-205ENST00000522122 IBSPP21815 317 aaPredicted RBP15.58■□□□□ 0.08
SYNPO-205ENST00000522122 ZNF174Q15697 407 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 TBC1D5Q92609 795 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 USP31Q70CQ4 1352 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 ITGA6P23229 1130 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 TRAF1Q13077 416 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 IGSF22Q8N9C0 903 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 EDC3Q96F86 508 aaKnown RBP15.58■□□□□ 0.08
SYNPO-205ENST00000522122 CAPZA3Q96KX2 299 aa15.58■□□□□ 0.08
SYNPO-205ENST00000522122 XPO4Q9C0E2 1151 aaKnown RBP15.58■□□□□ 0.08
SYNPO-205ENST00000522122 TLR7Q9NYK1 1049 aaKnown RBP15.58■□□□□ 0.08
SYNPO-205ENST00000522122 CTNNA2P26232 953 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 SPECC1LQ69YQ0 1117 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 MLKLQ8NB16 471 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 RRP36Q96EU6 259 aaKnown RBP15.57■□□□□ 0.08
SYNPO-205ENST00000522122 ZFP91Q96JP5 570 aaPredicted RBP15.57■□□□□ 0.08
SYNPO-205ENST00000522122 PLVAPQ9BX97 442 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 KIAA1468Q9P260 1216 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 PPP2R3AQ06190 1150 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 RESTQ13127 1097 aa15.57■□□□□ 0.08
SYNPO-205ENST00000522122 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
SYNPO-205ENST00000522122 ARID5AQ03989 594 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms