RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PDE3BQ13370 1112 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 TTLL4Q14679 1199 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 ECM1Q16610 540 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 ZSWIM9Q86XI8 627 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 CITED4Q96RK1 184 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 BRPF3Q9ULD4 1205 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 TRAK1Q9UPV9 953 aa6.1□□□□□ -1.43
CSMD3-209ENST00000519485 IGF2BP3O00425 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSMD3-209ENST00000519485 TSPAN15O95858 294 aa6.09□□□□□ -1.43
CSMD3-209ENST00000519485 ABL1P00519 1130 aa6.09□□□□□ -1.43
CSMD3-209ENST00000519485 ZNF211Q13398 564 aaPredicted RBP6.09□□□□□ -1.43
CSMD3-209ENST00000519485 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
CSMD3-209ENST00000519485 PDZD3Q86UT5 571 aa6.09□□□□□ -1.43
CSMD3-209ENST00000519485 ASB11Q8WXH4 323 aa6.09□□□□□ -1.43
CSMD3-209ENST00000519485 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSMD3-209ENST00000519485 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
CSMD3-209ENST00000519485 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
CSMD3-209ENST00000519485 NEFMP07197 916 aa6.08□□□□□ -1.44
CSMD3-209ENST00000519485 ANO2Q9NQ90 1003 aa6.08□□□□□ -1.44
CSMD3-209ENST00000519485 NDUFB5O43674 189 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 IGHA2P01877 340 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 ERVK-24P63145 666 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 ORC1Q13415 861 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 ZC3H12AQ5D1E8 599 aaKnown RBP6.07□□□□□ -1.44
CSMD3-209ENST00000519485 ARHGAP27Q6ZUM4 889 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 RNF214Q8ND24 703 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 CCDC74AQ96AQ1 378 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 HEXIM2Q96MH2 286 aaKnown RBP6.07□□□□□ -1.44
CSMD3-209ENST00000519485 TOX2Q96NM4 488 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 PPP1R16BQ96T49 567 aa6.07□□□□□ -1.44
CSMD3-209ENST00000519485 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-209ENST00000519485 RNGTTO60942 597 aaKnown RBP6.06□□□□□ -1.44
CSMD3-209ENST00000519485 HCLS1P14317 486 aaPredicted RBP6.06□□□□□ -1.44
CSMD3-209ENST00000519485 ARHGAP4P98171 946 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 PPP2R3AQ06190 1150 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 KCNMB1Q16558 191 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 SIAH1Q8IUQ4 282 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 ISL2Q96A47 359 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 TMEM39AQ9NV64 488 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 CACNA2D2Q9NY47 1150 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 LMCD1Q9NZU5 365 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 GTF2IRD1Q9UHL9 959 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 CTNND2Q9UQB3 1225 aa6.06□□□□□ -1.44
CSMD3-209ENST00000519485 XRCC5P13010 732 aaKnown RBP6.05□□□□□ -1.44
CSMD3-209ENST00000519485 RAP1GAPP47736 663 aa6.05□□□□□ -1.44
CSMD3-209ENST00000519485 GRM2Q14416 872 aa6.05□□□□□ -1.44
CSMD3-209ENST00000519485 ERICH6Q7L0X2 663 aa6.05□□□□□ -1.44
CSMD3-209ENST00000519485 SPACA3Q8IXA5 215 aa6.05□□□□□ -1.44
CSMD3-209ENST00000519485 TOP6BLQ8N6T0 577 aa6.05□□□□□ -1.44
CSMD3-209ENST00000519485 ZC3H12CQ9C0D7 883 aaKnown RBP6.05□□□□□ -1.44
CSMD3-209ENST00000519485 EIF1AYO14602 144 aaKnown RBP6.04□□□□□ -1.44
CSMD3-209ENST00000519485 CFPP27918 469 aa6.04□□□□□ -1.44
CSMD3-209ENST00000519485 CLCN7P51798 805 aa6.04□□□□□ -1.44
CSMD3-209ENST00000519485 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSMD3-209ENST00000519485 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
CSMD3-209ENST00000519485 RAPGEFL1Q9UHV5 662 aa6.04□□□□□ -1.44
CSMD3-209ENST00000519485 NISCHQ9Y2I1 1504 aa6.04□□□□□ -1.44
CSMD3-209ENST00000519485 GADD45BO75293 160 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-209ENST00000519485 ITIH2P19823 946 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 AFMP43652 599 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 ZP2Q05996 745 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 MLANAQ16655 118 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 B4GALNT3Q6L9W6 998 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 GLYCTKQ8IVS8 523 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 ZSCAN18Q8TBC5 510 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-209ENST00000519485 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
CSMD3-209ENST00000519485 PITPNM2Q9BZ72 1349 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 H3BRB1 525 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 ARNTP27540 789 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 ZNF157P51786 506 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-209ENST00000519485 ZNF252P-AS1Q0IIN9 211 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 IKZF1Q13422 519 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 NKPD1Q17RQ9 610 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 CCDC82Q8N4S0 544 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 CCER1Q8TC90 406 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-209ENST00000519485 EMILIN2Q9BXX0 1053 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 TUT1Q9H6E5 874 aaKnown RBP6.02□□□□□ -1.45
CSMD3-209ENST00000519485 PRDM10Q9NQV6 1147 aa6.02□□□□□ -1.45
CSMD3-209ENST00000519485 GPR182O15218 404 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 GLI1P08151 1106 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 NTF4P34130 210 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 RING1Q06587 406 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 DTHD1Q6ZMT9 781 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 SULF2Q8IWU5 870 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 KCNB2Q92953 911 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 DMRTB1Q96MA1 342 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 SSU72Q9NP77 194 aaKnown RBP6.01□□□□□ -1.45
CSMD3-209ENST00000519485 PRDM7Q9NQW5 492 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 USTQ9Y2C2 406 aa6.01□□□□□ -1.45
CSMD3-209ENST00000519485 KRT1P04264 644 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 NME2P22392 152 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 SCARA3Q6AZY7 606 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 LCNL1Q6ZST4 164 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 C22orf34Q6ZV56 151 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 LRRC56Q8IYG6 542 aaPredicted RBP6□□□□□ -1.45
CSMD3-209ENST00000519485 STK35Q8TDR2 534 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
CSMD3-209ENST00000519485 CSRNP1Q96S65 589 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms