RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 USP17L3A6NCW0 530 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 USP17L4A6NCW7 530 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 B4E1Z4 1266 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 F8W031 263 aaPredicted RBP14.61□□□□□ -0.07
SPIDR-209ENST00000519141 ANTXR2P58335 489 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 USP17L1Q7RTZ2 530 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 DAGLAQ9Y4D2 1042 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
SPIDR-209ENST00000519141 ADAMTSL1Q8N6G6 1762 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 DDX60LQ5H9U9 1706 aaKnown RBP14.6□□□□□ -0.07
SPIDR-209ENST00000519141 NUCB2P80303 420 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 DACT2Q5SW24 774 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 CTR9Q6PD62 1173 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 NECAB1Q8N987 351 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 MXD3Q9BW11 206 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 VPS33BQ9H267 617 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 TOMM22Q9NS69 142 aa14.6□□□□□ -0.07
SPIDR-209ENST00000519141 USP17L12C9JPN9 530 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 USP17L21D6R901 530 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 PCP11498 1178 aaKnown RBP14.59□□□□□ -0.07
SPIDR-209ENST00000519141 APOBRQ0VD83 1088 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 SBK1Q52WX2 424 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 AMOTL1Q8IY63 956 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 TEX11Q8IYF3 940 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 LARGE2Q8N3Y3 721 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 KCNQ5Q9NR82 932 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 MCM9Q9NXL9 1143 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 MYH1P12882 1939 aa14.59□□□□□ -0.07
SPIDR-209ENST00000519141 CYP2D7A0A087X1C5 515 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 KDM4AO75164 1064 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.07
SPIDR-209ENST00000519141 ST3GAL1Q11201 340 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 STK3Q13188 491 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 RAB3GAP1Q15042 981 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 RRP12Q5JTH9 1297 aaKnown RBP14.58□□□□□ -0.07
SPIDR-209ENST00000519141 CYB5R4Q7L1T6 521 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 GTF3C6Q969F1 213 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 TEKT1Q969V4 418 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 TMEM87BQ96K49 555 aa14.58□□□□□ -0.07
SPIDR-209ENST00000519141 ZNF277Q9NRM2 450 aaPredicted RBP14.58□□□□□ -0.07
SPIDR-209ENST00000519141 ECM29Q5VYK3 1845 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 SCNN1DP51172 638 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 HHIPL2Q6UWX4 724 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 INCENPQ9NQS7 918 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 MKRN1Q9UHC7 482 aaKnown RBP14.58□□□□□ -0.08
SPIDR-209ENST00000519141 NAP1L2Q9ULW6 460 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-209ENST00000519141 ANGEL1Q9UNK9 670 aaKnown RBP14.58□□□□□ -0.08
SPIDR-209ENST00000519141 TACC3Q9Y6A5 838 aa14.58□□□□□ -0.08
SPIDR-209ENST00000519141 YDJCA8MPS7 323 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 SH2B2O14492 632 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-209ENST00000519141 PFKFB2O60825 505 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 RHBDL3P58872 404 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 SART3Q15020 963 aaKnown RBP14.57□□□□□ -0.08
SPIDR-209ENST00000519141 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 ESR2Q92731 530 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 ZNF274Q96GC6 653 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-209ENST00000519141 TAOK3Q9H2K8 898 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 GPHNQ9NQX3 736 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-209ENST00000519141 COL4A5P29400 1685 aa14.57□□□□□ -0.08
SPIDR-209ENST00000519141 KLF18A0A0U1RQI7 1052 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 USP17L8P0C7I0 530 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 CYP2D6P10635 497 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 IARSP41252 1262 aaKnown RBP14.56□□□□□ -0.08
SPIDR-209ENST00000519141 EVCP57679 992 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
SPIDR-209ENST00000519141 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 KIAA0825Q8IV33 1275 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 NIM1KQ8IY84 436 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 ZSWIM5Q9P217 1185 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 SBF1O95248 1867 aa14.56□□□□□ -0.08
SPIDR-209ENST00000519141 ROBO3Q96MS0 1386 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 FLT1P17948 1338 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 GOLGA8BA8MQT2 603 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 SMIM22K7EJ46 135 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 IFIT3O14879 490 aaKnown RBP14.55□□□□□ -0.08
SPIDR-209ENST00000519141 ORC4O43929 436 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 FGRP09769 529 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 GJB2P29033 226 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 CRKP46108 304 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 PDE4BQ07343 736 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 NFKBIBQ15653 356 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 C12orf60Q5U649 245 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 MTA3Q9BTC8 594 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 MRIQ9BWK5 157 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 GPBP1L1Q9HC44 474 aaPredicted RBP14.55□□□□□ -0.08
SPIDR-209ENST00000519141 ERICH2A1L162 156 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
SPIDR-209ENST00000519141 PDIA3P30101 505 aaKnown RBP14.55□□□□□ -0.08
SPIDR-209ENST00000519141 NBR1Q14596 966 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
SPIDR-209ENST00000519141 TNPO1Q92973 898 aaKnown RBP14.55□□□□□ -0.08
SPIDR-209ENST00000519141 ZDHHC15Q96MV8 337 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 UBAC1Q9BSL1 405 aa14.55□□□□□ -0.08
SPIDR-209ENST00000519141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms