RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 E7EWF7 191 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 ST18O60284 1047 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 CPA1P15085 419 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 PSMA5P28066 241 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
PABPC1-203ENST00000517921 PPARAQ07869 468 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 TNIP1Q15025 636 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 CDC42EP5Q6NZY7 148 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 TGFBRAP1Q8WUH2 860 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 TTC14Q96N46 770 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 ANAPC4Q9UJX5 808 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 FLT1P17948 1338 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 NEDD4P46934 1319 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 CYP2D7A0A087X1C5 515 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 WDHD1O75717 1129 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-203ENST00000517921 HSPA6P17066 643 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 RPS6KB1P23443 525 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 RPS12P25398 132 aaKnown RBP12.55□□□□□ -0.4
PABPC1-203ENST00000517921 CTDSPL2Q05D32 466 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 BECN1Q14457 450 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 BLOC1S2Q6QNY1 142 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 MAPKAPK5Q8IW41 473 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-203ENST00000517921 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 SCN4AP35499 1836 aa12.55□□□□□ -0.4
PABPC1-203ENST00000517921 GLTPD2A6NH11 291 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 USP17L12C9JPN9 530 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 USP17L21D6R901 530 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 SMIM22K7EJ46 135 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 USP17L8P0C7I0 530 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 CYP2D6P10635 497 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
PABPC1-203ENST00000517921 EVX2Q03828 476 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
PABPC1-203ENST00000517921 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-203ENST00000517921 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
PABPC1-203ENST00000517921 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 C12orf60Q5U649 245 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 MTMR14Q8NCE2 650 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 NCOA7Q8NI08 942 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 ZBED3Q96IU2 234 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
PABPC1-203ENST00000517921 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-203ENST00000517921 B4E1Z4 1266 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 MCM2P49736 904 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 MMP14P50281 582 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 AK2P54819 239 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 NFIAQ12857 509 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 DLGAP5Q15398 846 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 MFSD6Q6ZSS7 791 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 DHX32Q7L7V1 743 aaKnown RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 DPF2Q92785 391 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 PRMT6Q96LA8 375 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 IDI2Q9BXS1 227 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 OSBPL5Q9H0X9 879 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 ALDH8A1Q9H2A2 487 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 RNF41Q9H4P4 317 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 INCENPQ9NQS7 918 aa12.52□□□□□ -0.41
PABPC1-203ENST00000517921 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
PABPC1-203ENST00000517921 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
PABPC1-203ENST00000517921 FGRP09769 529 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
PABPC1-203ENST00000517921 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 ANTXR2P58335 489 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 TRDNQ13061 729 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 PICALMQ13492 652 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 TOB2Q14106 344 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-203ENST00000517921 SLC4A8Q2Y0W8 1093 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 CYB5R4Q7L1T6 521 aa12.51□□□□□ -0.41
PABPC1-203ENST00000517921 RALYLQ86SE5 291 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms