RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ERICH2A1L162 156 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 KLRG2A4D1S0 409 aaPredicted RBP31■■■□□ 2.55
COL13A1-210ENST00000517713 WTAPQ15007 396 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 SYNE3Q6ZMZ3 975 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 FBXO18Q8NFZ0 1043 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 CRAMP1Q96RY5 1269 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 ZKSCAN3Q9BRR0 538 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 ESR2Q92731 530 aa30.99■■■□□ 2.55
COL13A1-210ENST00000517713 AKT1S1Q96B36 256 aa30.99■■■□□ 2.55
COL13A1-210ENST00000517713 ZNF396Q96N95 335 aaPredicted RBP30.99■■■□□ 2.55
COL13A1-210ENST00000517713 GPR101Q96P66 508 aaPredicted RBP30.99■■■□□ 2.55
COL13A1-210ENST00000517713 MYL10Q9BUA6 226 aa30.99■■■□□ 2.55
COL13A1-210ENST00000517713 UFL1O94874 794 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 CTR9Q6PD62 1173 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 CCDC144CPQ8IYA2 1237 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 TMTC2Q8N394 836 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 GGA1Q9UJY5 639 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 BAZ2AQ9UIF9 1905 aaKnown RBP30.98■■■□□ 2.55
COL13A1-210ENST00000517713 LDHBP07195 334 aaKnown RBP30.98■■■□□ 2.55
COL13A1-210ENST00000517713 OTUD7BQ6GQQ9 843 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 RGS22Q8NE09 1264 aa30.98■■■□□ 2.55
COL13A1-210ENST00000517713 ANP32BQ92688 251 aaKnown RBP30.98■■■□□ 2.55
COL13A1-210ENST00000517713 FAM217BQ9NTX9 383 aaPredicted RBP30.98■■■□□ 2.55
COL13A1-210ENST00000517713 ILDR1Q86SU0 546 aaPredicted RBP30.97■■■□□ 2.55
COL13A1-210ENST00000517713 CYP2D7A0A087X1C5 515 aa30.97■■■□□ 2.55
COL13A1-210ENST00000517713 SMIM22K7EJ46 135 aa30.97■■■□□ 2.55
COL13A1-210ENST00000517713 COL23A1Q86Y22 540 aaPredicted RBP30.97■■■□□ 2.55
COL13A1-210ENST00000517713 NLGN1Q8N2Q7 840 aa30.97■■■□□ 2.55
COL13A1-210ENST00000517713 ATP8A2Q9NTI2 1148 aa30.97■■■□□ 2.55
COL13A1-210ENST00000517713 KIAA1551Q9HCM1 1747 aa30.96■■■□□ 2.55
COL13A1-210ENST00000517713 NID2Q14112 1375 aa30.96■■■□□ 2.55
COL13A1-210ENST00000517713 NTRK3Q16288 839 aa30.96■■■□□ 2.55
COL13A1-210ENST00000517713 KLHL34Q8N239 644 aa30.96■■■□□ 2.55
COL13A1-210ENST00000517713 PGBD1Q96JS3 809 aa30.96■■■□□ 2.55
COL13A1-210ENST00000517713 UBAC1Q9BSL1 405 aa30.96■■■□□ 2.55
COL13A1-210ENST00000517713 USP17L12C9JPN9 530 aa30.95■■■□□ 2.55
COL13A1-210ENST00000517713 USP17L21D6R901 530 aa30.95■■■□□ 2.55
COL13A1-210ENST00000517713 PCP11498 1178 aaKnown RBP30.95■■■□□ 2.55
COL13A1-210ENST00000517713 LIG1P18858 919 aa30.95■■■□□ 2.55
COL13A1-210ENST00000517713 DCP1AQ9NPI6 582 aaPredicted RBP30.95■■■□□ 2.55
COL13A1-210ENST00000517713 PODXL2Q9NZ53 605 aa30.95■■■□□ 2.55
COL13A1-210ENST00000517713 RCOR1Q9UKL0 485 aa30.95■■■□□ 2.55
COL13A1-210ENST00000517713 DUOX1Q9NRD9 1551 aa30.95■■■□□ 2.54
COL13A1-210ENST00000517713 CEBPZQ03701 1054 aaKnown RBP30.95■■■□□ 2.54
COL13A1-210ENST00000517713 FGRP09769 529 aa30.94■■■□□ 2.54
COL13A1-210ENST00000517713 PHKBQ93100 1093 aa30.94■■■□□ 2.54
COL13A1-210ENST00000517713 USP28Q96RU2 1077 aa30.94■■■□□ 2.54
COL13A1-210ENST00000517713 ALG1Q9BT22 464 aa30.94■■■□□ 2.54
COL13A1-210ENST00000517713 CD209Q9NNX6 404 aa30.94■■■□□ 2.54
COL13A1-210ENST00000517713 IARSP41252 1262 aaKnown RBP30.93■■■□□ 2.54
COL13A1-210ENST00000517713 CCDC173Q0VFZ6 552 aa30.93■■■□□ 2.54
COL13A1-210ENST00000517713 GJB4Q9NTQ9 266 aa30.93■■■□□ 2.54
COL13A1-210ENST00000517713 GSTO1P78417 241 aa30.92■■■□□ 2.54
COL13A1-210ENST00000517713 TMC4Q7Z404 712 aa30.92■■■□□ 2.54
COL13A1-210ENST00000517713 FTOQ9C0B1 505 aaKnown RBP eCLIP30.92■■■□□ 2.54
COL13A1-210ENST00000517713 RANBP6O60518 1105 aaKnown RBP30.91■■■□□ 2.54
COL13A1-210ENST00000517713 RXRBP28702 533 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 SEC23AQ15436 765 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 FLAD1Q8NFF5 587 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 TNKSO95271 1327 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 IL1R1P14778 569 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 RCAN1P53805 252 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 BRAPQ7Z569 592 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 TBC1D16Q8TBP0 767 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 BICD2Q8TD16 824 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 ARPP21Q9UBL0 812 aaPredicted RBP30.91■■■□□ 2.54
COL13A1-210ENST00000517713 POLLQ9UGP5 575 aa30.91■■■□□ 2.54
COL13A1-210ENST00000517713 SSRP1Q08945 709 aaKnown RBP30.9■■■□□ 2.54
COL13A1-210ENST00000517713 RTN1Q16799 776 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 SBK1Q52WX2 424 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 RNF214Q8ND24 703 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 AIFM3Q96NN9 605 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 PPP1R9BQ96SB3 815 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 ANKRD31Q8N7Z5 1873 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 STK36Q9NRP7 1315 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 ZNF654Q8IZM8 581 aa30.9■■■□□ 2.54
COL13A1-210ENST00000517713 ZSCAN10Q96SZ4 725 aaPredicted RBP30.9■■■□□ 2.54
COL13A1-210ENST00000517713 LAMB1P07942 1786 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 PPEF1O14829 653 aaPredicted RBP30.89■■■□□ 2.54
COL13A1-210ENST00000517713 IFNAR1P17181 557 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 GRIK5Q16478 980 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 SP8Q8IXZ3 490 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 NUP62CLQ9H1M0 184 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 DACT1Q9NYF0 836 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 NRXN2Q9P2S2 1712 aa30.89■■■□□ 2.54
COL13A1-210ENST00000517713 PRDM1O75626 825 aa30.88■■■□□ 2.53
COL13A1-210ENST00000517713 FMNL1O95466 1100 aaPredicted RBP30.88■■■□□ 2.53
COL13A1-210ENST00000517713 KIF23Q02241 960 aaPredicted RBP30.88■■■□□ 2.53
COL13A1-210ENST00000517713 SLC26A6Q9BXS9 759 aa30.88■■■□□ 2.53
COL13A1-210ENST00000517713 DDX19AQ9NUU7 478 aaKnown RBP30.88■■■□□ 2.53
COL13A1-210ENST00000517713 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.88■■■□□ 2.53
COL13A1-210ENST00000517713 LRRC37AA6NMS7 1700 aa30.88■■■□□ 2.53
COL13A1-210ENST00000517713 POLR3DP05423 398 aaPredicted RBP30.88■■■□□ 2.53
COL13A1-210ENST00000517713 SLC3A2P08195 630 aaKnown RBP30.88■■■□□ 2.53
COL13A1-210ENST00000517713 RTEL1Q9NZ71 1219 aa30.88■■■□□ 2.53
COL13A1-210ENST00000517713 ECM29Q5VYK3 1845 aa30.88■■■□□ 2.53
COL13A1-210ENST00000517713 MYH2Q9UKX2 1941 aa30.87■■■□□ 2.53
COL13A1-210ENST00000517713 CCDC196A0A1B0GTZ2 297 aa30.87■■■□□ 2.53
COL13A1-210ENST00000517713 LDHCP07864 332 aa30.87■■■□□ 2.53
COL13A1-210ENST00000517713 KRT40Q6A162 431 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms