RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CEP295Q9C0D2 2601 aa4.72□□□□□ -1.65
SCARNA13-201ENST00000516672 RTL9Q8NET4 1388 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 HEG1Q9ULI3 1381 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 PYCARD-AS1I3L0S3 204 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 TNPO2O14787 897 aaKnown RBP4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 CYP19A1P11511 503 aaPredicted RBP4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 RAG1P15918 1043 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 HOXC9P31274 260 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 GRB10Q13322 594 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 ANGPT1Q15389 498 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 CCDC6Q16204 474 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 TMEM240Q5SV17 173 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 KANK4Q5T7N3 995 aaPredicted RBP4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 GPR161Q8N6U8 529 aaKnown RBP4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 MTMR14Q8NCE2 650 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 RIPOR3Q96MK2 946 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 PHF12Q96QT6 1004 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 DBNDD1Q9H9R9 158 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 IGF2RP11717 2491 aa4.71□□□□□ -1.66
SCARNA13-201ENST00000516672 NOTCH2Q04721 2471 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 DDX60Q8IY21 1712 aaKnown RBP4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 SLC30A4O14863 429 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 C8BP07358 591 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 PHKG2P15735 406 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 CANXP27824 592 aaKnown RBP4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 IREB2P48200 963 aaKnown RBP4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 COLEC12Q5KU26 742 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 LHX8Q68G74 356 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 DPP8Q6V1X1 898 aaPredicted RBP4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 SLC39A5Q6ZMH5 540 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 C16orf59Q7L2K0 433 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 ANKRD13AQ8IZ07 590 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 ARNTL2Q8WYA1 636 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 FAM84BQ96KN1 310 aaPredicted RBP4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 TMX4Q9H1E5 349 aaPredicted RBP4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 TBC1D2BQ9UPU7 963 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 SPG7Q9UQ90 795 aa4.7□□□□□ -1.66
SCARNA13-201ENST00000516672 NAV3Q8IVL0 2385 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 A0A087WZG4 1122 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 BCRP11274 1271 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 CETPP11597 493 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 SLC5A1P13866 664 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 NCLP19338 710 aaKnown RBP4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 NECTIN2Q92692 538 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 SMOC2Q9H3U7 446 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 BSDC1Q9NW68 430 aaPredicted RBP4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 NCDNQ9UBB6 729 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 XDHP47989 1333 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 ZNF521Q96K83 1311 aa4.69□□□□□ -1.66
SCARNA13-201ENST00000516672 ERVV-2B6SEH9 535 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 LPXNO60711 386 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 EFCAB14O75071 495 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 USP2O75604 605 aaPredicted RBP4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 LUC7L3O95232 432 aaKnown RBP4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 VIL1P09327 827 aaKnown RBP4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 PRKAR2AP13861 404 aaKnown RBP4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 CRY2Q49AN0 593 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 C4orf17Q53FE4 359 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 MAP3K21Q5TCX8 1036 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 IFNL2Q8IZJ0 200 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 ZNF843Q8N446 348 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 SLC39A7Q92504 469 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 RPGRQ92834 1020 aaKnown RBP4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 GATA6Q92908 595 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 REPIN1Q9BWE0 567 aaKnown RBP4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 ADAM33Q9BZ11 813 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 USP18Q9UMW8 372 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 ATP6V0A2Q9Y487 856 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 TACC3Q9Y6A5 838 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 DMXL2Q8TDJ6 3036 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 BRWD1Q9NSI6 2320 aa4.68□□□□□ -1.66
SCARNA13-201ENST00000516672 CREBBPQ92793 2442 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 COL12A1Q99715 3063 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 OTOGLQ3ZCN5 2332 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 FAM177BA6PVY3 158 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 KIAA0355O15063 1070 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 CA3P07451 260 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 CLTBP09497 229 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 GP1BBP13224 206 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 SPINK2P20155 84 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 AMPHP49418 695 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 CCDC174Q6PII3 467 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 TPTE2Q6XPS3 522 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 ZNF365Q70YC5 407 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 NME9Q86XW9 330 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 SUMF1Q8NBK3 374 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 POM121Q96HA1 1249 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 ZNF692Q9BU19 519 aaPredicted RBP4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 SLC4A1APQ9BWU0 796 aaKnown RBP4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 PCDHA11Q9Y5I1 949 aa4.67□□□□□ -1.66
SCARNA13-201ENST00000516672 DUOX1Q9NRD9 1551 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 OTOFQ9HC10 1997 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 TK2O00142 265 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 STXBP3O00186 592 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 PDHXO00330 501 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 ECE2O60344 883 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 WISP1O95388 367 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 USP17L8P0C7I0 530 aa4.66□□□□□ -1.66
SCARNA13-201ENST00000516672 ACRP10323 421 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms