RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 BHLHE22Q8NFJ8 381 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1338P-201ENST00000516328 PRDM7Q9NQW5 492 aa4.41□□□□□ -1.7
RNU6-1338P-201ENST00000516328 FAM53CQ9NYF3 392 aa4.41□□□□□ -1.7
RNU6-1338P-201ENST00000516328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.41□□□□□ -1.7
RNU6-1338P-201ENST00000516328 SNX11Q9Y5W9 270 aa4.41□□□□□ -1.7
RNU6-1338P-201ENST00000516328 CARNS1A5YM72 827 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ICMTO60725 284 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 NEFMP07197 916 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 KCNMB1Q16558 191 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 MLANAQ16655 118 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 KCNB2Q92953 911 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TNKS2Q9H2K2 1166 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 SSU72Q9NP77 194 aaKnown RBP4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 EGFL7Q9UHF1 273 aa4.4□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ZNF503-AS2A6NEH8 195 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ARID3CA6NKF2 412 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 NDUFB5O43674 189 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PPP1R15AO75807 674 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PDE3BQ13370 1112 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ASB11Q8WXH4 323 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ISL2Q96A47 359 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CCDC74AQ96AQ1 378 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TOX2Q96NM4 488 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 FAM129BQ96TA1 746 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 DNAJC25Q9H1X3 360 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GPN3Q9UHW5 284 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TRAK1Q9UPV9 953 aa4.39□□□□□ -1.71
RNU6-1338P-201ENST00000516328 H3BRB1 525 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 RAP1GAPP47736 663 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ZP2Q05996 745 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 IKZF1Q13422 519 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ECM1Q16610 540 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PDZD3Q86UT5 571 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CILP2Q8IUL8 1156 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GLYCTKQ8IVS8 523 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 RNF214Q8ND24 703 aa4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 HEXIM2Q96MH2 286 aaKnown RBP4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TUT1Q9H6E5 874 aaKnown RBP4.38□□□□□ -1.71
RNU6-1338P-201ENST00000516328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 EIF1AYO14602 144 aaKnown RBP4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ZNF865P0CJ78 1059 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CFPP27918 469 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PPP2R3AQ06190 1150 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GRM2Q14416 872 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 DTHD1Q6ZMT9 781 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 FAM214BQ7L5A3 538 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ZSCAN18Q8TBC5 510 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 LIN37Q96GY3 246 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PPP1R16BQ96T49 567 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TMEM39AQ9NV64 488 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GTF2IRD1Q9UHL9 959 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CTNND2Q9UQB3 1225 aa4.37□□□□□ -1.71
RNU6-1338P-201ENST00000516328 IGF2BP3O00425 579 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GPR182O15218 404 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TSPAN15O95858 294 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 AFMP43652 599 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 SERPINB4P48594 390 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 FCGRTP55899 365 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ERVK-24P63145 666 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ARHGAP4P98171 946 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ZC3H12AQ5D1E8 599 aaKnown RBP4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 SYDE1Q6ZW31 735 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 C1QL4Q86Z23 238 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 SULF2Q8IWU5 870 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 SPACA3Q8IXA5 215 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CCDC82Q8N4S0 544 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 STK35Q8TDR2 534 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CITED4Q96RK1 184 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 NIF3L1Q9GZT8 377 aa4.36□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GLI1P08151 1106 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 FYB2Q5VWT5 728 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 MAP1SQ66K74 1059 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 MPZL3Q6UWV2 235 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PRR23BQ6ZRT6 265 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ANKLE2Q86XL3 938 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 TMC1Q8TDI8 760 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GPBAR1Q8TDU6 330 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 EPS8L3Q8TE67 593 aaKnown RBP4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CSRNP1Q96S65 589 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 EMILIN2Q9BXX0 1053 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PRDM10Q9NQV6 1147 aa4.35□□□□□ -1.71
RNU6-1338P-201ENST00000516328 GNAT3A8MTJ3 354 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 IGHA2P01877 340 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ARNTP27540 789 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CLCN7P51798 805 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 NKPD1Q17RQ9 610 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PPM1JQ5JR12 505 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 LCNL1Q6ZST4 164 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 LRRC56Q8IYG6 542 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CCER1Q8TC90 406 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ACSBG1Q96GR2 724 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 KIRREL1Q96J84 757 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PPP4R2Q9NY27 417 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 CSADQ9Y600 493 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 PITPNM2Q9BZ72 1349 aa4.34□□□□□ -1.71
RNU6-1338P-201ENST00000516328 ZSCAN22P10073 491 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1338P-201ENST00000516328 XRCC5P13010 732 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms