RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CD209Q9NNX6 404 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
SNF8-214ENST00000515174 SUGT1Q9Y2Z0 365 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 FAM205AQ6ZU69 1335 aa12.01□□□□□ -0.49
SNF8-214ENST00000515174 CDK5RAP2Q96SN8 1893 aa12□□□□□ -0.49
SNF8-214ENST00000515174 DICER1Q9UPY3 1922 aaKnown RBP12□□□□□ -0.49
SNF8-214ENST00000515174 GLTPD2A6NH11 291 aa12□□□□□ -0.49
SNF8-214ENST00000515174 H0YIN7 160 aa12□□□□□ -0.49
SNF8-214ENST00000515174 HAND2P61296 217 aa12□□□□□ -0.49
SNF8-214ENST00000515174 MCTP1Q6DN14 999 aa12□□□□□ -0.49
SNF8-214ENST00000515174 MFSD6Q6ZSS7 791 aa12□□□□□ -0.49
SNF8-214ENST00000515174 ADGRA1Q86SQ6 560 aa12□□□□□ -0.49
SNF8-214ENST00000515174 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
SNF8-214ENST00000515174 TBC1D16Q8TBP0 767 aa12□□□□□ -0.49
SNF8-214ENST00000515174 IGDCC4Q8TDY8 1250 aa12□□□□□ -0.49
SNF8-214ENST00000515174 TBC1D22AQ8WUA7 517 aa12□□□□□ -0.49
SNF8-214ENST00000515174 GPR101Q96P66 508 aaPredicted RBP12□□□□□ -0.49
SNF8-214ENST00000515174 NSFL1CQ9UNZ2 370 aaKnown RBP12□□□□□ -0.49
SNF8-214ENST00000515174 IQSEC3Q9UPP2 1182 aaPredicted RBP12□□□□□ -0.49
SNF8-214ENST00000515174 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
SNF8-214ENST00000515174 SH2B2O14492 632 aaPredicted RBP11.99□□□□□ -0.49
SNF8-214ENST00000515174 PRKAB2O43741 272 aa11.99□□□□□ -0.49
SNF8-214ENST00000515174 MBD3O95983 291 aa11.99□□□□□ -0.49
SNF8-214ENST00000515174 DEKP35659 375 aaKnown RBP11.99□□□□□ -0.49
SNF8-214ENST00000515174 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
SNF8-214ENST00000515174 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
SNF8-214ENST00000515174 NSUN7Q8NE18 718 aaKnown RBP11.99□□□□□ -0.49
SNF8-214ENST00000515174 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
SNF8-214ENST00000515174 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
SNF8-214ENST00000515174 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
SNF8-214ENST00000515174 POLLQ9UGP5 575 aa11.99□□□□□ -0.49
SNF8-214ENST00000515174 SBF1O95248 1867 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 COL4A5P29400 1685 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 NID2Q14112 1375 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 UFL1O94874 794 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 CTDNEP1O95476 244 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
SNF8-214ENST00000515174 TDO2P48775 406 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 PPARAQ07869 468 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 PPP2R5BQ15173 497 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 MIGA1Q8NAN2 632 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 ZSWIM5Q9P217 1185 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
SNF8-214ENST00000515174 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
SNF8-214ENST00000515174 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
SNF8-214ENST00000515174 ORC4O43929 436 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 BAG3O95817 575 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 PRDX5P30044 214 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 CC2D2BQ6DHV5 1058 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
SNF8-214ENST00000515174 NAV1Q8NEY1 1877 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 ECM29Q5VYK3 1845 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 LAMB1P07942 1786 aa11.97□□□□□ -0.49
SNF8-214ENST00000515174 KLF18A0A0U1RQI7 1052 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 FSD2A1L4K1 749 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 B4E1Z4 1266 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 PRPF40AO75400 957 aaKnown RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 CHAF1AQ13111 956 aaPredicted RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 STK3Q13188 491 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 SART3Q15020 963 aaKnown RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 CTR9Q6PD62 1173 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 DZIP1Q86YF9 867 aaKnown RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 MPNDQ8N594 471 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 FAM184AQ8NB25 1140 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 ESR2Q92731 530 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 CNKSR1Q969H4 720 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 MRIQ9BWK5 157 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 LY9Q9HBG7 655 aa11.96□□□□□ -0.49
SNF8-214ENST00000515174 DCP1AQ9NPI6 582 aaPredicted RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 ARPP21Q9UBL0 812 aaPredicted RBP11.96□□□□□ -0.49
SNF8-214ENST00000515174 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 ELP1O95163 1332 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 NEDD4P46934 1319 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 GPR75-ASB3A0A0A6YYF3 556 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 JAK2O60674 1132 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 CDKL5O76039 1030 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 SLC3A2P08195 630 aaKnown RBP11.95□□□□□ -0.5
SNF8-214ENST00000515174 PLCG2P16885 1265 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 DYNLL1P63167 89 aaKnown RBP11.95□□□□□ -0.5
SNF8-214ENST00000515174 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 CPLX2Q6PUV4 134 aaKnown RBP11.95□□□□□ -0.5
SNF8-214ENST00000515174 APOA5Q6Q788 366 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 CHST3Q7LGC8 479 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 EYA3Q99504 573 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 RTFDC1Q9BY42 306 aaPredicted RBP11.95□□□□□ -0.5
SNF8-214ENST00000515174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNF8-214ENST00000515174 TACC3Q9Y6A5 838 aa11.95□□□□□ -0.5
SNF8-214ENST00000515174 GAKO14976 1311 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms