RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 GNAQP50148 359 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 ZNF830Q96NB3 372 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 RTL9Q8NET4 1388 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 OVOS2A0A0G2JMS6 1433 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 ANO6Q4KMQ2 910 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 JAKMIP3Q5VZ66 844 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 PIK3AP1Q6ZUJ8 805 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 PTF1AQ7RTS3 328 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 ATG9AQ7Z3C6 839 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 LRRC47Q8N1G4 583 aaKnown RBP11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 RRP36Q96EU6 259 aaKnown RBP11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 COL3A1P02461 1466 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF6-214ENST00000515170 VWA3AA6NCI4 1184 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 USP17L8P0C7I0 530 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 UBE3CQ15386 1083 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 DYNLL2Q96FJ2 89 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 CALM1P0DP23 149 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 CALM2P0DP24 149 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 CALM3P0DP25 149 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 RBM10P98175 930 aaKnown RBP11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 KRT40Q6A162 431 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 KCNG4Q8TDN1 519 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 DACH1Q9UI36 760 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 ITSN1Q15811 1721 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 GRAPQ13588 217 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 GRAPLQ8TC17 118 aaPredicted RBP11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 GTF3C6Q969F1 213 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 KAZALD1Q96I82 304 aa11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
RAPGEF6-214ENST00000515170 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 ESPNB1AK53 854 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 CAMTA2O94983 1202 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 XRCC6P12956 609 aaKnown RBP eCLIP11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 USH1GQ495M9 461 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 ARHGAP27Q6ZUM4 889 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 FRMPD2Q68DX3 1309 aaPredicted RBP11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 POLR1AO95602 1720 aaPredicted RBP11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 ADCY5O95622 1261 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 KRT2P35908 639 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 MECOMQ03112 1051 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 SMARCC2Q8TAQ2 1214 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 STAMQ92783 540 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 SMARCE1Q969G3 411 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 CHRNA5P30532 468 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 SLC1A4P43007 532 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 STX17P56962 302 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 SCRN1Q12765 414 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 RAB34Q9BZG1 259 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 IL25Q9H293 177 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 GJB4Q9NTQ9 266 aa11.34□□□□□ -0.59
RAPGEF6-214ENST00000515170 BBOX1O75936 387 aa11.33□□□□□ -0.59
RAPGEF6-214ENST00000515170 DEFB132Q7Z7B7 95 aa11.33□□□□□ -0.59
RAPGEF6-214ENST00000515170 CCDC148Q8NFR7 591 aa11.33□□□□□ -0.59
RAPGEF6-214ENST00000515170 C6orf50Q9HD87 102 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 HOMER2Q9NSB8 354 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 PDIA3P30101 505 aaKnown RBP11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 LRSAM1Q6UWE0 723 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 LEMD3Q9Y2U8 911 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 CPDO75976 1380 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 C3P01024 1663 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 CYP2D6P10635 497 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 MATR3P43243 847 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■■■□□ 19.2
RAPGEF6-214ENST00000515170 SPICE1Q8N0Z3 855 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 CALML4Q96GE6 196 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
RAPGEF6-214ENST00000515170 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 DEXIO95424 95 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 STAT6P42226 847 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 TRIM28Q13263 835 aaKnown RBP11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 NECTIN1Q15223 517 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 ZFYVE27Q5T4F4 411 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 FTOQ9C0B1 505 aaKnown RBP eCLIP11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 NEURL4Q96JN8 1562 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 FAM196BA6NMK8 535 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 RABL6Q3YEC7 729 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 TMX1Q9H3N1 280 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 TRMT1Q9NXH9 659 aaKnown RBP11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 ZSWIM5Q9P217 1185 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 RIPOR2Q9Y4F9 1068 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 BRD1O95696 1058 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 AOPEPQ8N6M6 819 aa11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
RAPGEF6-214ENST00000515170 UBN2Q6ZU65 1347 aa11.31□□□□□ -0.6
RAPGEF6-214ENST00000515170 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms