RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 C17orf50Q8WW18 174 aa8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 SH2B1Q9NRF2 756 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 SNUPNO95149 360 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 RPS6KB1P23443 525 aa8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 ZSCAN31Q96LW9 406 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 SEC62Q99442 399 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 CWC25Q9NXE8 425 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 DISP2A7MBM2 1401 aa8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 PYGLP06737 847 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 IFT88Q13099 833 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 GBP6Q6ZN66 633 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 NECAB1Q8N987 351 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 ZNF483Q8TF39 744 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 ARAP2Q8WZ64 1704 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 MCM6Q14566 821 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 E2F5Q15329 346 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 CDC37L1Q7L3B6 337 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 EFCAB13Q8IY85 973 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 TDRD7Q8NHU6 1098 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 BICD1Q96G01 975 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 MMTAG2Q9BU76 263 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 SH3TC1Q8TE82 1336 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 C21orf2O43822 256 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 CCNHP51946 323 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 LRRC24Q50LG9 513 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 GTF3C6Q969F1 213 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 TACO1Q9BSH4 297 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 ISCA1Q9BUE6 129 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 PHLPP1O60346 1717 aa8.56□□□□□ -1.04
PDLIM5-219ENST00000514743 IMPDH2P12268 514 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 ELF1P32519 619 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 SLFNL1Q499Z3 407 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 TTC30AQ86WT1 665 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 GPR108Q9NPR9 543 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 RABL2BQ9UNT1 228 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 SLIT2O94813 1529 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 TPP2P29144 1249 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 LEKR1Q6ZMV7 388 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 ARMC2Q8NEN0 867 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 FBXO18Q8NFZ0 1043 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 GOLGA5Q8TBA6 731 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 ZNF594Q96JF6 807 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 GNL3LQ9NVN8 582 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 TMOD4Q9NZQ9 345 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 LRP5O75197 1615 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 ROBO1Q9Y6N7 1651 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 EME2A4GXA9 379 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 PSMA5P28066 241 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 USP8P40818 1118 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 ZRSR1Q15695 479 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 SLC5A9Q2M3M2 681 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 WDR78Q5VTH9 848 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 BLOC1S2Q6QNY1 142 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 KBTBD3Q8NAB2 608 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 SPTLC3Q9NUV7 552 aa8.55□□□□□ -1.04
PDLIM5-219ENST00000514743 NRAPQ86VF7 1730 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 ABCB7O75027 752 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 CYP21A2P08686 494 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 RNF20Q5VTR2 975 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 STOX1Q6ZVD7 989 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 MICAL1Q8TDZ2 1067 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 PUS3Q9BZE2 481 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 RREB1Q92766 1687 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 KDM4FA0A1W2PPD8 638 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 EIF3CLB5ME19 914 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 POLR3GO15318 223 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 PPFIA4O75335 1185 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 IL15P40933 162 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 TIMM10P62072 90 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 TPM4P67936 248 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 SNX1Q13596 522 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 MCMDC2Q4G0Z9 681 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 EIF3CQ99613 913 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 SLX1AQ9BQ83 275 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 FAM53CQ9NYF3 392 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 LMCD1Q9NZU5 365 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 PUF60Q9UHX1 559 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 DOCK2Q92608 1830 aa8.54□□□□□ -1.04
PDLIM5-219ENST00000514743 EYA2O00167 538 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 CIAO1O76071 339 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 GRIK3Q13003 919 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 KCNV1Q6PIU1 500 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 ANKRD18AQ8IVF6 992 aa8.53□□□□□ -1.04
PDLIM5-219ENST00000514743 PLEKHG4BQ96PX9 1271 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms