RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 CACNA2D2Q9NY47 1150 aa8.08□□□□□ -1.12
SNX25-206ENST00000513433 SYNJ1O43426 1573 aa8.08□□□□□ -1.12
SNX25-206ENST00000513433 WRNQ14191 1432 aaPredicted RBP eCLIP8.07□□□□□ -1.12
SNX25-206ENST00000513433 SLFN14P0C7P3 912 aa8.07□□□□□ -1.12
SNX25-206ENST00000513433 ID3Q02535 119 aa8.07□□□□□ -1.12
SNX25-206ENST00000513433 AGBL5Q8NDL9 886 aa8.07□□□□□ -1.12
SNX25-206ENST00000513433 ATXN3LQ9H3M9 355 aa8.07□□□□□ -1.12
SNX25-206ENST00000513433 DISC1Q9NRI5 854 aa8.07□□□□□ -1.12
SNX25-206ENST00000513433 TMEM39AQ9NV64 488 aa8.07□□□□□ -1.12
SNX25-206ENST00000513433 LIG1P18858 919 aa8.06□□□□□ -1.12
SNX25-206ENST00000513433 TMC1Q8TDI8 760 aa8.06□□□□□ -1.12
SNX25-206ENST00000513433 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
SNX25-206ENST00000513433 WDR97A6NE52 1622 aa8.06□□□□□ -1.12
SNX25-206ENST00000513433 HNRNPUQ00839 825 aaKnown RBP eCLIP8.05□□□□□ -1.12
SNX25-206ENST00000513433 PPP2R3AQ06190 1150 aa8.05□□□□□ -1.12
SNX25-206ENST00000513433 CYP27C1Q4G0S4 372 aa8.05□□□□□ -1.12
SNX25-206ENST00000513433 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
SNX25-206ENST00000513433 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
SNX25-206ENST00000513433 DAGLAQ9Y4D2 1042 aa8.05□□□□□ -1.12
SNX25-206ENST00000513433 POLA1P09884 1462 aaPredicted RBP8.05□□□□□ -1.12
SNX25-206ENST00000513433 TARBP1Q13395 1621 aaKnown RBP8.04□□□□□ -1.12
SNX25-206ENST00000513433 TREHO43280 583 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 ENOX2Q16206 610 aaKnown RBP8.04□□□□□ -1.12
SNX25-206ENST00000513433 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
SNX25-206ENST00000513433 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 BCO2Q9BYV7 579 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 MKNK2Q9HBH9 465 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 FGD5Q6ZNL6 1462 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 LMTK3Q96Q04 1460 aa8.04□□□□□ -1.12
SNX25-206ENST00000513433 IFT140Q96RY7 1462 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 BTBD11A6QL63 1104 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 BRD1O95696 1058 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNX25-206ENST00000513433 JUNBP17275 347 aaPredicted RBP8.03□□□□□ -1.12
SNX25-206ENST00000513433 FCGRTP55899 365 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 ZNF252P-AS1Q0IIN9 211 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 ZC3H12AQ5D1E8 599 aaKnown RBP8.03□□□□□ -1.12
SNX25-206ENST00000513433 TP53INP2Q8IXH6 220 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 SMYD4Q8IYR2 804 aaPredicted RBP8.03□□□□□ -1.12
SNX25-206ENST00000513433 C3orf58Q8NDZ4 430 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
SNX25-206ENST00000513433 ARNTP27540 789 aa8.02□□□□□ -1.13
SNX25-206ENST00000513433 ZNF157P51786 506 aaPredicted RBP8.02□□□□□ -1.13
SNX25-206ENST00000513433 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
SNX25-206ENST00000513433 FLCNQ8NFG4 579 aa8.02□□□□□ -1.13
SNX25-206ENST00000513433 STK35Q8TDR2 534 aa8.02□□□□□ -1.13
SNX25-206ENST00000513433 LRRC4CQ9HCJ2 640 aa8.02□□□□□ -1.13
SNX25-206ENST00000513433 NME2P22392 152 aa8.01□□□□□ -1.13
SNX25-206ENST00000513433 ERVK-24P63145 666 aa8.01□□□□□ -1.13
SNX25-206ENST00000513433 SULF2Q8IWU5 870 aa8.01□□□□□ -1.13
SNX25-206ENST00000513433 PIDD1Q9HB75 910 aa8.01□□□□□ -1.13
SNX25-206ENST00000513433 PCOLCE2Q9UKZ9 415 aa8.01□□□□□ -1.13
SNX25-206ENST00000513433 SLC5A6Q9Y289 635 aa8.01□□□□□ -1.13
SNX25-206ENST00000513433 NEFMP07197 916 aa8□□□□□ -1.13
SNX25-206ENST00000513433 FAM87AP0C7U9 286 aa8□□□□□ -1.13
SNX25-206ENST00000513433 PLCB3Q01970 1234 aa8□□□□□ -1.13
SNX25-206ENST00000513433 TTLL4Q14679 1199 aa8□□□□□ -1.13
SNX25-206ENST00000513433 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
SNX25-206ENST00000513433 FBF1Q8TES7 1133 aa8□□□□□ -1.13
SNX25-206ENST00000513433 ASIC4Q96FT7 647 aa8□□□□□ -1.13
SNX25-206ENST00000513433 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
SNX25-206ENST00000513433 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
SNX25-206ENST00000513433 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
SNX25-206ENST00000513433 EIF4G3O43432 1585 aaKnown RBP8□□□□□ -1.13
SNX25-206ENST00000513433 ABCA10Q8WWZ4 1543 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 CDK5R2Q13319 367 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.99□□□□□ -1.13
SNX25-206ENST00000513433 NXPE4Q6UWF7 544 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 SPRED2Q7Z698 418 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 RNF214Q8ND24 703 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 NETO1Q8TDF5 533 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 NECAB3Q96P71 396 aaPredicted RBP7.99□□□□□ -1.13
SNX25-206ENST00000513433 ZC3H12CQ9C0D7 883 aaKnown RBP7.99□□□□□ -1.13
SNX25-206ENST00000513433 VAV3Q9UKW4 847 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 PPM1HQ9ULR3 514 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 ABCA5Q8WWZ7 1642 aa7.99□□□□□ -1.13
SNX25-206ENST00000513433 FAM214BQ7L5A3 538 aa7.98□□□□□ -1.13
SNX25-206ENST00000513433 POU5F2Q8N7G0 328 aa7.98□□□□□ -1.13
SNX25-206ENST00000513433 FBXO41Q8TF61 875 aa7.98□□□□□ -1.13
SNX25-206ENST00000513433 DUSP23Q9BVJ7 150 aa7.98□□□□□ -1.13
SNX25-206ENST00000513433 ARAP1Q96P48 1450 aa7.98□□□□□ -1.13
SNX25-206ENST00000513433 PNMA6FA0A0J9YX94 578 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 GIPC1O14908 333 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 RING1Q06587 406 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 FMR1Q06787 632 aaKnown RBP eCLIP7.97□□□□□ -1.13
SNX25-206ENST00000513433 KCNB2Q92953 911 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 ISL2Q96A47 359 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 ARID3AQ99856 593 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 LGR6Q9HBX8 967 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 RAD54L2Q9Y4B4 1467 aa7.97□□□□□ -1.13
SNX25-206ENST00000513433 SOGA1O94964 1423 aa7.96□□□□□ -1.13
SNX25-206ENST00000513433 PBRM1Q86U86 1689 aa7.96□□□□□ -1.13
SNX25-206ENST00000513433 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.14
SNX25-206ENST00000513433 PAPLNO95428 1278 aa7.96□□□□□ -1.14
SNX25-206ENST00000513433 BMP6P22004 513 aa7.96□□□□□ -1.14
SNX25-206ENST00000513433 FUT4P22083 530 aa7.96□□□□□ -1.14
SNX25-206ENST00000513433 NTF4P34130 210 aa7.96□□□□□ -1.14
SNX25-206ENST00000513433 OXCT1P55809 520 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms