RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 PDE6AP16499 860 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 MAP2K2P36507 400 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 RGS3P49796 1198 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 GRM1Q13255 1194 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 PICALMQ13492 652 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 UBE3CQ15386 1083 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 ANKRD13AQ8IZ07 590 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 EVI5LQ96CN4 794 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 CCDC136Q96JN2 1154 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 CAPNS2Q96L46 248 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 CSRNP1Q96S65 589 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 FSD1Q9BTV5 496 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 AATFQ9NY61 560 aaKnown RBP eCLIP9□□□□□ -0.97
NR1I3-231ENST00000512340 TAOK2Q9UL54 1235 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 THSD7BQ9C0I4 1608 aa9□□□□□ -0.97
NR1I3-231ENST00000512340 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 HIP1O00291 1037 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 GNAT2P19087 354 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 CACNB3P54284 484 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 PDE1AP54750 535 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
NR1I3-231ENST00000512340 TCP10Q12799 353 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 PRKG1Q13976 671 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 MAP3K11Q16584 847 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 NBPF12Q5TAG4 269 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-231ENST00000512340 OTUD7BQ6GQQ9 843 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 CENPQQ7L2Z9 268 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-231ENST00000512340 TTC6Q86TZ1 520 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 PIAS4Q8N2W9 510 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-231ENST00000512340 CRACR2BQ8N4Y2 399 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-231ENST00000512340 KBTBD3Q8NAB2 608 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 TMEM39BQ9GZU3 492 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 PI4KBQ9UBF8 816 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 STAP2Q9UGK3 403 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 PCDHAC2Q9Y5I4 1007 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 PAPPA2Q9BXP8 1791 aa8.99□□□□□ -0.97
NR1I3-231ENST00000512340 ZNF646O15015 1829 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-231ENST00000512340 AKAP11Q9UKA4 1901 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 UBE2Q2LH0YL09 131 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 RNF113AO15541 343 aaKnown RBP8.98□□□□□ -0.97
NR1I3-231ENST00000512340 IGHDP01880 384 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 INHBEP58166 350 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 SREBF2Q12772 1141 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 PRAMEF18Q5VWM3 479 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 FOXP4Q8IVH2 680 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-231ENST00000512340 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 ANTXR1Q9H6X2 564 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 PICK1Q9NRD5 415 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 HERC5Q9UII4 1024 aaKnown RBP8.98□□□□□ -0.97
NR1I3-231ENST00000512340 ZNF532Q9HCE3 1301 aa8.98□□□□□ -0.97
NR1I3-231ENST00000512340 PDE4DIPQ5VU43 2346 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 ADD2P35612 726 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 RHBDL3P58872 404 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 MIGA1Q8NAN2 632 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 SH3RF3Q8TEJ3 882 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 TGFBRAP1Q8WUH2 860 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 APPBP2Q92624 585 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 RILPL2Q969X0 211 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 PKNOX2Q96KN3 472 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 WRNIP1Q96S55 665 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 OSBPL5Q9H0X9 879 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 ZNF287Q9HBT7 754 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 RTN4Q9NQC3 1192 aaKnown RBP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 ATP8A2Q9NTI2 1148 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 SCAF8Q9UPN6 1271 aaKnown RBP8.97□□□□□ -0.97
NR1I3-231ENST00000512340 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
NR1I3-231ENST00000512340 MAST2Q6P0Q8 1798 aa8.96□□□□□ -0.97
NR1I3-231ENST00000512340 COL2A1P02458 1487 aaPredicted RBP8.96□□□□□ -0.97
NR1I3-231ENST00000512340 CCDC85CA6NKD9 419 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 TBC1D12O60347 775 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 APPP05067 770 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 SLC3A2P08195 630 aaKnown RBP8.96□□□□□ -0.98
NR1I3-231ENST00000512340 FMR1Q06787 632 aaKnown RBP eCLIP8.96□□□□□ -0.98
NR1I3-231ENST00000512340 NFIAQ12857 509 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 LDLRAD1Q5T700 205 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 CYP4F22Q6NT55 531 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 MAPKAPK5Q8IW41 473 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 PI4K2BQ8TCG2 481 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 TEPSINQ96N21 525 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 TBC1D2Q9BYX2 928 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 OSBPL3Q9H4L5 887 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 FAM198AQ9UFP1 575 aa8.96□□□□□ -0.98
NR1I3-231ENST00000512340 MANSC4A6NHS7 340 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-231ENST00000512340 CTNND1O60716 968 aaKnown RBP8.95□□□□□ -0.98
NR1I3-231ENST00000512340 USP2O75604 605 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-231ENST00000512340 MBD4O95243 580 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 ALDH1A1P00352 501 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 SLC10A3P09131 477 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 KCNA4P22459 653 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 TSHZ3Q63HK5 1081 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 GIMAP6Q6P9H5 292 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 MIGA2Q7L4E1 593 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 ERO1BQ86YB8 467 aa8.95□□□□□ -0.98
NR1I3-231ENST00000512340 RUFY2Q8WXA3 655 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms