RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ZNF76	P36508	570 aa		9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	PTPN11	Q06124	597 aa	Predicted RBP	9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	DIEXF	Q68CQ4	756 aa	Known RBP	9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	PHC3	Q8NDX5	983 aa		9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	JARID2	Q92833	1246 aa	Predicted RBP	9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	FANCD2OS	Q96PS1	177 aa		9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	RSRP1	Q9BUV0	290 aa		9.47	□□□□□ -0.89
LINC01088-208	ENST00000511895	RECK	O95980	971 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	NFKBIB	Q15653	356 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	ZC3H12A	Q5D1E8	599 aa	Known RBP	9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	LDLRAD1	Q5T700	205 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	GAL3ST3	Q96A11	431 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	TMEM74	Q96NL1	305 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	KBTBD4	Q9NVX7	518 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	CACNA2D2	Q9NY47	1150 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	KIAA1522	Q9P206	1035 aa	Predicted RBP	9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	PCDHGC5	Q9Y5F6	944 aa		9.46	□□□□□ -0.9
LINC01088-208	ENST00000511895	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	FAM95C	A0A1B0GW59	222 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	RNGTT	O60942	597 aa	Known RBP	9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	C12orf40	Q86WS4	652 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	CLEC10A	Q8IUN9	316 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	TRIM42	Q8IWZ5	723 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	C7orf69	Q9H7B7	122 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	SSU72	Q9NP77	194 aa	Known RBP	9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	COPRS	Q9NQ92	184 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	DISC1	Q9NRI5	854 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	DAGLA	Q9Y4D2	1042 aa		9.45	□□□□□ -0.9
LINC01088-208	ENST00000511895	HMX2	A2RU54	273 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895		K7ELQ4	463 aa	Predicted RBP	9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	PF4	P02776	101 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	HCLS1	P14317	486 aa	Predicted RBP	9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	FAM160A1	Q05DH4	1040 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	CAMK2G	Q13555	558 aa	Predicted RBP	9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	TTLL4	Q14679	1199 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	SNAP47	Q5SQN1	464 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	PAOX	Q6QHF9	649 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	ERMP1	Q7Z2K6	904 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	FAM83C	Q9BQN1	747 aa		9.44	□□□□□ -0.9
LINC01088-208	ENST00000511895	SCAMP3	O14828	347 aa	Known RBP	9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	NFIC	P08651	508 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	ERVK-24	P63145	666 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	MAP7	Q14244	749 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	PPM1J	Q5JR12	505 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	HDX	Q7Z353	690 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	RNF34	Q969K3	372 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	PLPPR2	Q96GM1	343 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	LGR6	Q9HBX8	967 aa		9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	METTL5	Q9NRN9	209 aa	Known RBP	9.43	□□□□□ -0.9
LINC01088-208	ENST00000511895	PRAMEF27	A3QJZ7	478 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	FANCC	Q00597	558 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	LMNB2	Q03252	620 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	INPP5A	Q14642	412 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	WIPI1	Q5MNZ9	446 aa	Predicted RBP	9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	LRFN4	Q6PJG9	635 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	RHOV	Q96L33	236 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	SEMA6C	Q9H3T2	930 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	GSX1	Q9H4S2	264 aa	Predicted RBP	9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	ACSS3	Q9H6R3	686 aa		9.42	□□□□□ -0.9
LINC01088-208	ENST00000511895	BPNT1	O95861	308 aa		9.41	□□□□□ -0.9
LINC01088-208	ENST00000511895	FST	P19883	344 aa		9.41	□□□□□ -0.9
LINC01088-208	ENST00000511895	CDK8	P49336	464 aa		9.41	□□□□□ -0.9
LINC01088-208	ENST00000511895	BNC2	Q6ZN30	1099 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC01088-208	ENST00000511895	SMYD4	Q8IYR2	804 aa	Predicted RBP	9.41	□□□□□ -0.9
LINC01088-208	ENST00000511895	RNF214	Q8ND24	703 aa		9.41	□□□□□ -0.9
LINC01088-208	ENST00000511895	GOLM1	Q8NBJ4	401 aa		9.4	□□□□□ -0.9
LINC01088-208	ENST00000511895	EZH1	Q92800	747 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC01088-208	ENST00000511895	SNCAIP	Q9Y6H5	919 aa		9.4	□□□□□ -0.9
LINC01088-208	ENST00000511895	GSC2	O15499	205 aa		9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	NEFM	P07197	916 aa		9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	EIF4A3	P38919	411 aa	Known RBP	9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	PRSS36	Q5K4E3	855 aa		9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	CDC37L1	Q7L3B6	337 aa		9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	CCDC84	Q86UT8	332 aa	Predicted RBP	9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	USP48	Q86UV5	1035 aa		9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	FBXL6	Q8N531	539 aa		9.39	□□□□□ -0.91
LINC01088-208	ENST00000511895	F13A1	P00488	732 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	IGLV1-40	P01703	118 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	ETF1	P62495	437 aa	Known RBP	9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	RPL6	Q02878	288 aa	Known RBP	9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	NFIA	Q12857	509 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	C9orf131	Q5VYM1	1079 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	RNF43	Q68DV7	783 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	GATAD2B	Q8WXI9	593 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	ISL2	Q96A47	359 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	MFSD14A	Q96MC6	490 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	PCOLCE2	Q9UKZ9	415 aa		9.38	□□□□□ -0.91
LINC01088-208	ENST00000511895	FANCG	O15287	622 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	ZNF394	Q53GI3	561 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	ZBTB37	Q5TC79	503 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	CYFIP1	Q7L576	1253 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	TBC1D32	Q96NH3	1257 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	DBNDD2	Q9BQY9	259 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	SUPT16H	Q9Y5B9	1047 aa	Known RBP	9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	PCDHGB7	Q9Y5F8	929 aa		9.37	□□□□□ -0.91
LINC01088-208	ENST00000511895	DYNC1LI2	O43237	492 aa	Predicted RBP	9.36	□□□□□ -0.91
LINC01088-208	ENST00000511895	ADAM23	O75077	832 aa		9.36	□□□□□ -0.91
LINC01088-208	ENST00000511895	RING1	Q06587	406 aa		9.36	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms