RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 FGFR2P21802 821 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 PRDX5P30044 214 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 RGS3P49796 1198 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 PRRT2Q7Z6L0 340 aaPredicted RBP12.9□□□□□ -0.34
MBD4-208ENST00000509828 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
MBD4-208ENST00000509828 ZFPM1Q8IX07 1006 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
MBD4-208ENST00000509828 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 PAWRQ96IZ0 340 aaKnown RBP12.9□□□□□ -0.34
MBD4-208ENST00000509828 SIL1Q9H173 461 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 DENND2AQ9ULE3 1009 aa12.9□□□□□ -0.34
MBD4-208ENST00000509828 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 CTNND1O60716 968 aaKnown RBP12.89□□□□□ -0.35
MBD4-208ENST00000509828 ENTPD3O75355 529 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 PICALMQ13492 652 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 IRF5Q13568 498 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
MBD4-208ENST00000509828 CENPFP49454 3210 aa12.88□□□□□ -0.35
MBD4-208ENST00000509828 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
MBD4-208ENST00000509828 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
MBD4-208ENST00000509828 ABCF2Q9UG63 623 aa12.88□□□□□ -0.35
MBD4-208ENST00000509828 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
MBD4-208ENST00000509828 PTPRCP08575 1304 aa12.88□□□□□ -0.35
MBD4-208ENST00000509828 PHF20L1A8MW92 1017 aa12.87□□□□□ -0.35
MBD4-208ENST00000509828 SEMA3EO15041 775 aa12.87□□□□□ -0.35
MBD4-208ENST00000509828 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
MBD4-208ENST00000509828 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
MBD4-208ENST00000509828 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.87□□□□□ -0.35
MBD4-208ENST00000509828 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
MBD4-208ENST00000509828 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
MBD4-208ENST00000509828 ZMYND8Q9ULU4 1186 aaPredicted RBP12.87□□□□□ -0.35
MBD4-208ENST00000509828 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
MBD4-208ENST00000509828 SOX1O00570 391 aaPredicted RBP12.86□□□□□ -0.35
MBD4-208ENST00000509828 DEFB123Q8N688 67 aa12.86□□□□□ -0.35
MBD4-208ENST00000509828 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
MBD4-208ENST00000509828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.86□□□□□ -0.35
MBD4-208ENST00000509828 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
MBD4-208ENST00000509828 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
MBD4-208ENST00000509828 HMGCRP04035 888 aa12.85□□□□□ -0.35
MBD4-208ENST00000509828 UBTFL1P0CB47 393 aaPredicted RBP12.85□□□□□ -0.35
MBD4-208ENST00000509828 BTDP43251 543 aa12.85□□□□□ -0.35
MBD4-208ENST00000509828 PHKA1P46020 1223 aa12.85□□□□□ -0.35
MBD4-208ENST00000509828 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
MBD4-208ENST00000509828 CCDC84Q86UT8 332 aaPredicted RBP12.85□□□□□ -0.35
MBD4-208ENST00000509828 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
MBD4-208ENST00000509828 DIS3LQ8TF46 1054 aaKnown RBP12.85□□□□□ -0.35
MBD4-208ENST00000509828 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
MBD4-208ENST00000509828 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
MBD4-208ENST00000509828 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
MBD4-208ENST00000509828 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
MBD4-208ENST00000509828 CIAO1O76071 339 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 SYN1P17600 705 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 IL15P40933 162 aaPredicted RBP12.84□□□□□ -0.35
MBD4-208ENST00000509828 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
MBD4-208ENST00000509828 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
MBD4-208ENST00000509828 SPP2Q13103 211 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 FAM110CQ1W6H9 321 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 TREML2Q5T2D2 321 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 ANKLE1Q8NAG6 615 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 C11orf49Q9H6J7 331 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 RPTORQ8N122 1335 aa12.84□□□□□ -0.35
MBD4-208ENST00000509828 LDHCP07864 332 aa12.83□□□□□ -0.36
MBD4-208ENST00000509828 GSTO1P78417 241 aa12.83□□□□□ -0.36
MBD4-208ENST00000509828 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
MBD4-208ENST00000509828 CCDC102BQ68D86 513 aa12.83□□□□□ -0.36
MBD4-208ENST00000509828 SH3BP5LQ7L8J4 393 aa12.83□□□□□ -0.36
MBD4-208ENST00000509828 PROCA1Q8NCQ7 364 aaPredicted RBP12.83□□□□□ -0.36
MBD4-208ENST00000509828 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.36
MBD4-208ENST00000509828 UBE2OQ9C0C9 1292 aaKnown RBP12.83□□□□□ -0.36
MBD4-208ENST00000509828 CWC22Q9HCG8 908 aaKnown RBP12.83□□□□□ -0.36
MBD4-208ENST00000509828 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.83□□□□□ -0.36
MBD4-208ENST00000509828 SLURP2P0DP57 97 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 CYP2B6P20813 491 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 ADORA1P30542 326 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 BMP8BP34820 402 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
MBD4-208ENST00000509828 HMGCS2P54868 508 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
MBD4-208ENST00000509828 ZNF280CQ8ND82 737 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
MBD4-208ENST00000509828 TMOD4Q9NZQ9 345 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 GAKO14976 1311 aa12.82□□□□□ -0.36
MBD4-208ENST00000509828 FAM196BA6NMK8 535 aa12.81□□□□□ -0.36
MBD4-208ENST00000509828 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
MBD4-208ENST00000509828 TIMM10P62072 90 aa12.81□□□□□ -0.36
MBD4-208ENST00000509828 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
MBD4-208ENST00000509828 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
MBD4-208ENST00000509828 Q7L0L9 218 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms