RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 TMEM63CQ9P1W3 806 aa9.18□□□□□ -0.94
SSBP2-213ENST00000509743 ZSWIM5Q9P217 1185 aa9.18□□□□□ -0.94
SSBP2-213ENST00000509743 ORC3Q9UBD5 711 aaPredicted RBP9.18□□□□□ -0.94
SSBP2-213ENST00000509743 ATP6V0A2Q9Y487 856 aa9.18□□□□□ -0.94
SSBP2-213ENST00000509743 MAST2Q6P0Q8 1798 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 MINDY4BA8MYZ0 360 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 MMP10P09238 476 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 SRGNP10124 158 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 XRCC6P12956 609 aaKnown RBP eCLIP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 FDPSP14324 419 aaKnown RBP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 PLCG2P16885 1265 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 PPP4CP60510 307 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 WTAPQ15007 396 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 RRP12Q5JTH9 1297 aaKnown RBP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 CTR9Q6PD62 1173 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 BRAPQ7Z569 592 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 LEO1Q8WVC0 666 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 WASF1Q92558 559 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 C8orf76Q96K31 380 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 DCP1AQ9NPI6 582 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 AATFQ9NY61 560 aaKnown RBP eCLIP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 RBM27Q9P2N5 1060 aaKnown RBP9.17□□□□□ -0.94
SSBP2-213ENST00000509743 SUGT1Q9Y2Z0 365 aa9.17□□□□□ -0.94
SSBP2-213ENST00000509743 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 MROH7-TTC4A0A0A0MT08 1334 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 FAM205AQ6ZU69 1335 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 GOLGA6L4A6NEF3 574 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 USP17L21D6R901 530 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 DTNBO60941 627 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 PDE4BQ07343 736 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 TTC6Q86TZ1 520 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 MICU3Q86XE3 530 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 IQCA1Q86XH1 822 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 GAS2L3Q86XJ1 694 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 ANP32BQ92688 251 aaKnown RBP9.16□□□□□ -0.94
SSBP2-213ENST00000509743 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 ZSCAN10Q96SZ4 725 aaPredicted RBP9.16□□□□□ -0.94
SSBP2-213ENST00000509743 COA1Q9GZY4 146 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSBP2-213ENST00000509743 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 BRWD3Q6RI45 1802 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 RGPD3A6NKT7 1758 aaPredicted RBP9.16□□□□□ -0.94
SSBP2-213ENST00000509743 RGPD4Q7Z3J3 1758 aa9.16□□□□□ -0.94
SSBP2-213ENST00000509743 ROBO3Q96MS0 1386 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 LAMA4Q16363 1823 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 TNKSO95271 1327 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 SYCE3A1L190 88 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
SSBP2-213ENST00000509743 CALM1P0DP23 149 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 CALM2P0DP24 149 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 CALM3P0DP25 149 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 IFNAR1P17181 557 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 IARSP41252 1262 aaKnown RBP9.15□□□□□ -0.94
SSBP2-213ENST00000509743 USP5P45974 858 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 SSRP1Q08945 709 aaKnown RBP9.15□□□□□ -0.94
SSBP2-213ENST00000509743 TRIM29Q14134 588 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 SEC23AQ15436 765 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 RTN1Q16799 776 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 CCDC178Q5BJE1 867 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 STYK1Q6J9G0 422 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 TRIM22Q8IYM9 498 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 ZNF654Q8IZM8 581 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 MPNDQ8N594 471 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
SSBP2-213ENST00000509743 EYA3Q99504 573 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 ALG1Q9BT22 464 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 TSPY26PQ9H489 355 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 INCENPQ9NQS7 918 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 DDX19AQ9NUU7 478 aaKnown RBP9.15□□□□□ -0.94
SSBP2-213ENST00000509743 STK32BQ9NY57 414 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 POLLQ9UGP5 575 aa9.15□□□□□ -0.94
SSBP2-213ENST00000509743 CACNA1SQ13698 1873 aa9.15□□□□□ -0.95
SSBP2-213ENST00000509743 LRRC37AA6NMS7 1700 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 GAKO14976 1311 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 MYH7P12883 1935 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 RANBP6O60518 1105 aaKnown RBP9.14□□□□□ -0.95
SSBP2-213ENST00000509743 DDAH1O94760 285 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 CDC27P30260 824 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 ADD1P35611 737 aaKnown RBP9.14□□□□□ -0.95
SSBP2-213ENST00000509743 NASPP49321 788 aaPredicted RBP9.14□□□□□ -0.95
SSBP2-213ENST00000509743 FOSBP53539 338 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 NTRK3Q16288 839 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 SLC15A2Q16348 729 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 MFSD14BQ5SR56 506 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 C12orf60Q5U649 245 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 DPP8Q6V1X1 898 aaPredicted RBP9.14□□□□□ -0.95
SSBP2-213ENST00000509743 CATIPQ7Z7H3 387 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 RAB11FIP4Q86YS3 637 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 RTFDC1Q9BY42 306 aaPredicted RBP9.14□□□□□ -0.95
SSBP2-213ENST00000509743 ZC3H12CQ9C0D7 883 aaKnown RBP9.14□□□□□ -0.95
SSBP2-213ENST00000509743 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
SSBP2-213ENST00000509743 SENP2Q9HC62 589 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms