RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
COPS4-207ENST00000509317 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
COPS4-207ENST00000509317 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
COPS4-207ENST00000509317 PTPRAP18433 802 aa12.8□□□□□ -0.36
COPS4-207ENST00000509317 PRRT2Q7Z6L0 340 aaPredicted RBP12.8□□□□□ -0.36
COPS4-207ENST00000509317 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
COPS4-207ENST00000509317 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
COPS4-207ENST00000509317 CXCL11O14625 94 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 SYN1P17600 705 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 ZEB1P37275 1124 aaPredicted RBP12.79□□□□□ -0.36
COPS4-207ENST00000509317 RGS3P49796 1198 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 TRIM32Q13049 653 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 TREML2Q5T2D2 321 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 ANKRD13CQ8N6S4 541 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 WDR66Q8TBY9 1149 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 SIL1Q9H173 461 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 MRS2Q9HD23 443 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 AFG3L2Q9Y4W6 797 aa12.79□□□□□ -0.36
COPS4-207ENST00000509317 DDTLA6NHG4 134 aaPredicted RBP12.78□□□□□ -0.36
COPS4-207ENST00000509317 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
COPS4-207ENST00000509317 SLC5A1P13866 664 aa12.78□□□□□ -0.36
COPS4-207ENST00000509317 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
COPS4-207ENST00000509317 ATG9AQ7Z3C6 839 aa12.78□□□□□ -0.36
COPS4-207ENST00000509317 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
COPS4-207ENST00000509317 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
COPS4-207ENST00000509317 PAK6Q9NQU5 681 aaPredicted RBP12.78□□□□□ -0.36
COPS4-207ENST00000509317 EYA2O00167 538 aa12.77□□□□□ -0.37
COPS4-207ENST00000509317 PEX10O60683 326 aa12.77□□□□□ -0.37
COPS4-207ENST00000509317 LDHBP07195 334 aaKnown RBP12.77□□□□□ -0.37
COPS4-207ENST00000509317 PHKA1P46020 1223 aa12.77□□□□□ -0.37
COPS4-207ENST00000509317 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.37
COPS4-207ENST00000509317 LPIN2Q92539 896 aa12.77□□□□□ -0.37
COPS4-207ENST00000509317 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
COPS4-207ENST00000509317 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
COPS4-207ENST00000509317 LAMA2P24043 3122 aaKnown RBP12.76□□□□□ -0.37
COPS4-207ENST00000509317 ADORA1P30542 326 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 PICALMQ13492 652 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 FASTKD5Q7L8L6 764 aaKnown RBP12.76□□□□□ -0.37
COPS4-207ENST00000509317 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
COPS4-207ENST00000509317 DEFB123Q8N688 67 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 PXYLP1Q8TE99 480 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 GDF15Q99988 308 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPS4-207ENST00000509317 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
COPS4-207ENST00000509317 VCANP13611 3396 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 MGAMO43451 1857 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
COPS4-207ENST00000509317 IRF5Q13568 498 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
COPS4-207ENST00000509317 NECAB2Q7Z6G3 386 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 ALPK3Q96L96 1907 aa12.75□□□□□ -0.37
COPS4-207ENST00000509317 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
COPS4-207ENST00000509317 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
COPS4-207ENST00000509317 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
COPS4-207ENST00000509317 MAGEA10P43363 369 aaPredicted RBP12.74□□□□□ -0.37
COPS4-207ENST00000509317 COA7Q96BR5 231 aa12.74□□□□□ -0.37
COPS4-207ENST00000509317 PA2G4Q9UQ80 394 aaKnown RBP12.74□□□□□ -0.37
COPS4-207ENST00000509317 EYSQ5T1H1 3165 aa12.73□□□□□ -0.37
COPS4-207ENST00000509317 RRP1BQ14684 758 aaKnown RBP12.73□□□□□ -0.37
COPS4-207ENST00000509317 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
COPS4-207ENST00000509317 ABCF2Q9UG63 623 aa12.73□□□□□ -0.37
COPS4-207ENST00000509317 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
COPS4-207ENST00000509317 GAKO14976 1311 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
COPS4-207ENST00000509317 ENTPD3O75355 529 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 BTDP43251 543 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 HMGCS2P54868 508 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 MAP3K10Q02779 954 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 SPP2Q13103 211 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 RASGRF1Q13972 1273 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 DZIP1Q86YF9 867 aaKnown RBP12.72□□□□□ -0.37
COPS4-207ENST00000509317 ZNF384Q8TF68 577 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 GJD2Q9UKL4 321 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
COPS4-207ENST00000509317 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 HMGCRP04035 888 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 BMP8BP34820 402 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 FAM110CQ1W6H9 321 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
COPS4-207ENST00000509317 CCDC102BQ68D86 513 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 FAM9BQ8IZU0 186 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 TRIB2Q92519 343 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.37
COPS4-207ENST00000509317 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 DENND2AQ9ULE3 1009 aa12.71□□□□□ -0.37
COPS4-207ENST00000509317 PFASO15067 1338 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 CYP2B6P20813 491 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 RHBDL3P58872 404 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 TIMM10P62072 90 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 ASCC2Q9H1I8 757 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms