RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 USP17L12C9JPN9 530 aa17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 USP17L21D6R901 530 aa17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 DDNO94850 711 aaPredicted RBP17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 CACNB3P54284 484 aa17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 PPARAQ07869 468 aa17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 STOX1Q6ZVD7 989 aa17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 DDX4Q9NQI0 724 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-211ENST00000509023 LAMB1P07942 1786 aa17.61■□□□□ 0.41
SNCAIP-211ENST00000509023 DDX60LQ5H9U9 1706 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-211ENST00000509023 CYP2D7A0A087X1C5 515 aa17.61■□□□□ 0.41
SNCAIP-211ENST00000509023 E7EWF7 191 aa17.61■□□□□ 0.41
SNCAIP-211ENST00000509023 CTDSPL2Q05D32 466 aa17.61■□□□□ 0.41
SNCAIP-211ENST00000509023 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
SNCAIP-211ENST00000509023 CASTP20810 708 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 NFIAQ12857 509 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 SBK1Q52WX2 424 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 GPRC5DQ9NZD1 345 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 SAP30BPQ9UHR5 308 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 WNT10BO00744 389 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 EGFRP00533 1210 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 CYP2D6P10635 497 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 PSMA5P28066 241 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 RBM26Q5T8P6 1007 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 SAMD7Q7Z3H4 446 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 ZBED3Q96IU2 234 aaPredicted RBP17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 IDI2Q9BXS1 227 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
SNCAIP-211ENST00000509023 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 SMIM22K7EJ46 135 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 EVX2Q03828 476 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 ANAPC4Q9UJX5 808 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 MYH1P12882 1939 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 H7C1D1 291 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 MYO1BO43795 1136 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 CPA1P15085 419 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 NEK4P51957 841 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 KIF4BQ2VIQ3 1234 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 NBPF9Q3BBW0 867 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 DPY19L2Q6NUT2 758 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 STK11IPQ8N1F8 1099 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 OSBPL5Q9H0X9 879 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 ZSWIM6Q9HCJ5 1215 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-211ENST00000509023 TCP10Q12799 353 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 SPDYE2Q495Y8 402 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 AKNAD1Q5T1N1 836 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 C12orf60Q5U649 245 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 BLOC1S2Q6QNY1 142 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.4
SNCAIP-211ENST00000509023 EPS15P42566 896 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 INCENPQ9NQS7 918 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 NEDD4P46934 1319 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 PLCD1P51178 756 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 NCOA7Q8NI08 942 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
SNCAIP-211ENST00000509023 TCP10L2B9ZVM9 353 aa17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 ST18O60284 1047 aa17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 HMGB1P09429 215 aaKnown RBP17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 LMOD1P29536 600 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 TRDNQ13061 729 aa17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 RALYLQ86SE5 291 aaKnown RBP17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 RNF41Q9H4P4 317 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 ROBO3Q96MS0 1386 aa17.56■□□□□ 0.4
SNCAIP-211ENST00000509023 SLC3A2P08195 630 aaKnown RBP17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 TRPM4Q8TD43 1214 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 GLTPD2A6NH11 291 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 ENTPD3O75355 529 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 TCEANC2Q96MN5 208 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
SNCAIP-211ENST00000509023 B4E1Z4 1266 aa17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 RRP12Q5JTH9 1297 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 DHX32Q7L7V1 743 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 TTC6Q86TZ1 520 aa17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 MB21D2Q8IYB1 491 aaPredicted RBP17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 DYNLL2Q96FJ2 89 aa17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 L3MBTL3Q96JM7 780 aaPredicted RBP17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 TTC14Q96N46 770 aa17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 KRT23Q9C075 422 aa17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
SNCAIP-211ENST00000509023 PRDM1O75626 825 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms