RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 RARSP54136 660 aaKnown RBP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 CALD1Q05682 793 aaKnown RBP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 FOXC1Q12948 553 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 SAFB2Q14151 953 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 SV2BQ7L1I2 683 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 OXCT2Q9BYC2 517 aaPredicted RBP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 C11orf16Q9NQ32 467 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 LATS2Q9NRM7 1088 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
CCDC149-206ENST00000508236 ARHGEF40Q8TER5 1519 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
CCDC149-206ENST00000508236 RIMS2Q9UQ26 1411 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 SPINT1O43278 529 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 MAP3K11Q16584 847 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 FBXL19Q6PCT2 694 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 CPLX3Q8WVH0 158 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.82
CCDC149-206ENST00000508236 RHOVQ96L33 236 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 CDK19Q9BWU1 502 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 SNTG2Q9NY99 539 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 AKAP2Q9Y2D5 859 aa9.9□□□□□ -0.82
CCDC149-206ENST00000508236 KNDC1Q76NI1 1749 aa9.9□□□□□ -0.83
CCDC149-206ENST00000508236 IL16Q14005 1332 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 A0A1W2PNR3 127 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 J3QL48 77 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 FYB1O15117 783 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 CTSOP43234 321 aaPredicted RBP9.89□□□□□ -0.83
CCDC149-206ENST00000508236 ANAPC15P60006 121 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 PEAR1Q5VY43 1037 aaPredicted RBP9.89□□□□□ -0.83
CCDC149-206ENST00000508236 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC149-206ENST00000508236 DEPDC7Q96QD5 511 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 R3HCC1Q9Y3T6 440 aaKnown RBP9.89□□□□□ -0.83
CCDC149-206ENST00000508236 ATP7BP35670 1465 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 NLRP1Q9C000 1473 aa9.89□□□□□ -0.83
CCDC149-206ENST00000508236 CDC42BPGQ6DT37 1551 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 GREM1O60565 184 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 FBXO24O75426 580 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 CYP2E1P05181 493 aaPredicted RBP9.88□□□□□ -0.83
CCDC149-206ENST00000508236 MSX1P28360 303 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 FAM160A1Q05DH4 1040 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 DTHD1Q6ZMT9 781 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 PHC3Q8NDX5 983 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 KANSL3Q9P2N6 904 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 PRKAG3Q9UGI9 489 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
CCDC149-206ENST00000508236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
CCDC149-206ENST00000508236 MAP2P11137 1827 aaKnown RBP9.88□□□□□ -0.83
CCDC149-206ENST00000508236 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 KIF13AQ9H1H9 1805 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 DIAPH1O60610 1272 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 HSP90AA1P07900 732 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 GARTP22102 1010 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 TMPOP42166 694 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 RASA3Q14644 834 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 NOL8Q76FK4 1167 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 LRP10Q7Z4F1 713 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 PLEKHF1Q96S99 279 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 LIN7BQ9HAP6 207 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 METTL14Q9HCE5 456 aaKnown RBP9.87□□□□□ -0.83
CCDC149-206ENST00000508236 IFT57Q9NWB7 429 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 UBP1Q9NZI7 540 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 TLR6Q9Y2C9 796 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
CCDC149-206ENST00000508236 NRXN3Q9Y4C0 1643 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 TTC24A2A3L6 582 aaPredicted RBP9.86□□□□□ -0.83
CCDC149-206ENST00000508236 IGHDP01880 384 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 PF4P02776 101 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 LIG3P49916 1009 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 PLEKHG4Q58EX7 1191 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 PCNX4Q63HM2 1172 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 TPTE2Q6XPS3 522 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 SKAP1Q86WV1 359 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 FRAT1Q92837 279 aaPredicted RBP9.86□□□□□ -0.83
CCDC149-206ENST00000508236 SRRTQ9BXP5 876 aaKnown RBP9.86□□□□□ -0.83
CCDC149-206ENST00000508236 BRD7Q9NPI1 651 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 TIMMDC1Q9NPL8 285 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 COL4A3BPQ9Y5P4 624 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
CCDC149-206ENST00000508236 ITSN1Q15811 1721 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 FAM221BA6H8Z2 402 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 RGS3P49796 1198 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 CHMP4BP1P59074 171 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
CCDC149-206ENST00000508236 SNAP47Q5SQN1 464 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms