RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 IMMTQ16891 758 aaKnown RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 RABL6Q3YEC7 729 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 ARHGAP29Q52LW3 1261 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZMYM1Q5SVZ6 1142 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 MPRIPQ6WCQ1 1025 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 ELOA2Q8IYF1 753 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 GPR161Q8N6U8 529 aaKnown RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 USHBP1Q8N6Y0 703 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 LINC00301Q8NCQ3 95 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 KAZALD1Q96I82 304 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 AK7Q96M32 723 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 FMNL2Q96PY5 1086 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 TMUB1Q9BVT8 246 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 XPO4Q9C0E2 1151 aaKnown RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 SIL1Q9H173 461 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 PAG1Q9NWQ8 432 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 TLR7Q9NYK1 1049 aaKnown RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 IFNKQ9P0W0 207 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 DBNLQ9UJU6 430 aaKnown RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 NAP1L2Q9ULW6 460 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 PCDHA7Q9UN72 937 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 ABCC6O95255 1503 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZNF609O15014 1411 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 MAP3K15Q6ZN16 1313 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 SPEF2Q9C093 1822 aa5.71□□□□□ -1.49
HMGB3P16-201ENST00000508037 MARF1Q9Y4F3 1742 aaKnown RBP5.71□□□□□ -1.49
HMGB3P16-201ENST00000508037 ABCC12Q96J65 1359 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 LTN1O94822 1766 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 E7EWF7 191 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 RNF113AO15541 343 aaKnown RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 KCNQ3O43525 872 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 TLL1O43897 1013 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 PPP6R2O75170 966 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZNF202O95125 648 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 ADH1BP00325 375 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 SERPINC1P01008 464 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 ANXA1P04083 346 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 IGKV5-2P06315 115 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 PNMA6AP0CW24 399 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 TOP1P11387 765 aaKnown RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 CASQ1P31415 396 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 CYP2C19P33261 490 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 IL15P40933 162 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 FANCCQ00597 558 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 MYL5Q02045 173 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 APOBRQ0VD83 1088 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 TFCP2Q12800 502 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 AIMP1Q12904 312 aaKnown RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 PROSER3Q2NL68 480 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 CT47A1Q5JQC4 288 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 MYSM1Q5VVJ2 828 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 ANO1Q5XXA6 986 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 SYT10Q6XYQ8 523 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 RALYLQ86SE5 291 aaKnown RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 NBPF11Q86T75 865 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 MYD88Q99836 296 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 ATG3Q9NT62 314 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 ORC3Q9UBD5 711 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 MYH15Q9Y2K3 1946 aa5.71□□□□□ -1.5
HMGB3P16-201ENST00000508037 TMEM94Q12767 1356 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 FAM237AA0A1B0GTK4 181 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 STX10O60499 249 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 CUTAO60888 179 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ERLIN1O75477 346 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TADA3O75528 432 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 EIF3JO75822 258 aaKnown RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 CIAO1O76071 339 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 CTDNEP1O95476 244 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 SNRPA1P09661 255 aaKnown RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 SYKP43405 635 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 NDUFA8P51970 172 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 UBASH3AP57075 661 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCT2P78371 535 aaKnown RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 PTPN12Q05209 780 aaKnown RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRDNQ13061 729 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 GNL2Q13823 731 aaKnown RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRIM29Q14134 588 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TTLL12Q14166 644 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ARID5BQ14865 1188 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 SLC39A14Q15043 492 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 BRD3Q15059 726 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ERCC6LQ2NKX8 1250 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 CFAP100Q494V2 611 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 MUM1L1Q5H9M0 696 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 MORN1Q5T089 497 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 CYB5RLQ6IPT4 315 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 KANK3Q6NY19 840 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ARMCX5Q6P1M9 558 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZNF790Q6PG37 636 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 VSTM4Q8IW00 320 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TTC5Q8N0Z6 440 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRIML1Q8N9V2 468 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 PLBD2Q8NHP8 589 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 NCOA7Q8NI08 942 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 XAGE3Q8WTP9 111 aa5.7□□□□□ -1.5
HMGB3P16-201ENST00000508037 RAPGEF4Q8WZA2 1011 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms