RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 GATAD2BQ8WXI9 593 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 KCNB2Q92953 911 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 CORO1BQ9BR76 489 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 USP35Q9P2H5 1018 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 PRKAG2Q9UGJ0 569 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 ARID5AQ03989 594 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 GNL2Q13823 731 aaKnown RBP5.5□□□□□ -1.53
LSM6-205ENST00000507449 SCARA3Q6AZY7 606 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 SLITRK4Q8IW52 837 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 DRC1Q96MC2 740 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 USP26Q9BXU7 913 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 TANGO6Q9C0B7 1094 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 KRT82Q9NSB4 513 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 GINM1Q9NU53 330 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 PCDHGC5Q9Y5F6 944 aa5.5□□□□□ -1.53
LSM6-205ENST00000507449 LIG1P18858 919 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 SOX9P48436 509 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 APOBRQ0VD83 1088 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 MPP2Q14168 576 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 INPP5AQ14642 412 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 SF3A1Q15459 793 aaKnown RBP5.49□□□□□ -1.53
LSM6-205ENST00000507449 KIF4BQ2VIQ3 1234 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 KIAA1211Q6ZU35 1233 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 REC114Q7Z4M0 266 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 WDR18Q9BV38 432 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 EFR3BQ9Y2G0 817 aa5.49□□□□□ -1.53
LSM6-205ENST00000507449 POLR3KQ9Y2Y1 108 aaPredicted RBP5.49□□□□□ -1.53
LSM6-205ENST00000507449 ROBO2Q9HCK4 1378 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 GFRA2O00451 464 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 LMNB1P20700 586 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 NASPP49321 788 aaPredicted RBP5.48□□□□□ -1.53
LSM6-205ENST00000507449 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
LSM6-205ENST00000507449 PDE3AQ14432 1141 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 RSPO4Q2I0M5 234 aaPredicted RBP5.48□□□□□ -1.53
LSM6-205ENST00000507449 SEZ6Q53EL9 994 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 LRFN4Q6PJG9 635 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 DHX38Q92620 1227 aaKnown RBP5.48□□□□□ -1.53
LSM6-205ENST00000507449 NKD1Q969G9 470 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 SEC16BQ96JE7 1060 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 TMPRSS13Q9BYE2 586 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 PCDHA4Q9UN74 947 aa5.48□□□□□ -1.53
LSM6-205ENST00000507449 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
LSM6-205ENST00000507449 ELNP15502 786 aa5.47□□□□□ -1.53
LSM6-205ENST00000507449 RAC1P63000 192 aa5.47□□□□□ -1.53
LSM6-205ENST00000507449 SHISA2Q6UWI4 295 aa5.47□□□□□ -1.53
LSM6-205ENST00000507449 PLPPR2Q96GM1 343 aa5.47□□□□□ -1.53
LSM6-205ENST00000507449 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
LSM6-205ENST00000507449 BRMS1Q9HCU9 246 aa5.47□□□□□ -1.53
LSM6-205ENST00000507449 DCDC2CA8MYV0 355 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 DYRK3O43781 588 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 AOC2O75106 756 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 CLCQ05315 142 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 TRIM28Q13263 835 aaKnown RBP5.46□□□□□ -1.54
LSM6-205ENST00000507449 GRIK4Q16099 956 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 DUOXA2Q1HG44 320 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 ZC3H12AQ5D1E8 599 aaKnown RBP5.46□□□□□ -1.54
LSM6-205ENST00000507449 WIPI1Q5MNZ9 446 aaPredicted RBP5.46□□□□□ -1.54
LSM6-205ENST00000507449 ACAD11Q709F0 780 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.46□□□□□ -1.54
LSM6-205ENST00000507449 VPS37DQ86XT2 251 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 ACSBG1Q96GR2 724 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 SPATA32Q96LK8 384 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 PPP1R1BQ9UD71 204 aaPredicted RBP5.46□□□□□ -1.54
LSM6-205ENST00000507449 PPP1R9AQ9ULJ8 1098 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 PPT2Q9UMR5 302 aa5.46□□□□□ -1.54
LSM6-205ENST00000507449 MEGF11A6BM72 1044 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 SPDYE3A6NKU9 549 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 TMPRSS2O15393 492 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 GRIN3BO60391 1043 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 ATP2B1P20020 1258 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 RING1Q06587 406 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 COL9A2Q14055 689 aaPredicted RBP5.45□□□□□ -1.54
LSM6-205ENST00000507449 CWF19L2Q2TBE0 894 aaKnown RBP5.45□□□□□ -1.54
LSM6-205ENST00000507449 NKAPLQ5M9Q1 402 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 EXOSC6Q5RKV6 272 aaKnown RBP5.45□□□□□ -1.54
LSM6-205ENST00000507449 IGF2-ASQ6U949 168 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 CCDC81Q6ZN84 652 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 CYFIP1Q7L576 1253 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 AGGF1Q8N302 714 aaeCLIP5.45□□□□□ -1.54
LSM6-205ENST00000507449 UBXN4Q92575 508 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 RUSC1Q9BVN2 902 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 CORINQ9Y5Q5 1042 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 CSADQ9Y600 493 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 ARID1BQ8NFD5 2236 aaPredicted RBP5.45□□□□□ -1.54
LSM6-205ENST00000507449 SYNGAP1Q96PV0 1343 aa5.45□□□□□ -1.54
LSM6-205ENST00000507449 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
LSM6-205ENST00000507449 HYAL3O43820 417 aaPredicted RBP5.44□□□□□ -1.54
LSM6-205ENST00000507449 ALX3O95076 343 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 BPNT1O95861 308 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 SPATA31C1P0DKV0 1188 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 NTF4P34130 210 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 PRSS36Q5K4E3 855 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 GK5Q6ZS86 529 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 C12orf40Q86WS4 652 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 REXO1Q8N1G1 1221 aaKnown RBP5.44□□□□□ -1.54
LSM6-205ENST00000507449 DCAF11Q8TEB1 546 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 ARMC5Q96C12 935 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 SHDQ96IW2 340 aa5.44□□□□□ -1.54
LSM6-205ENST00000507449 MRPL18Q9H0U6 180 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms