RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 C1QTNF8P60827 252 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 RASA3Q14644 834 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 DIXDC1Q155Q3 683 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 ALX1Q15699 326 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 MCMDC2Q4G0Z9 681 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 TEX11Q8IYF3 940 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 C2orf69Q8N8R5 385 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 ANTXR1Q9H6X2 564 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 TDRD3Q9H7E2 651 aaKnown RBP10.16□□□□□ -0.78
PDGFC-205ENST00000506880 NAV1Q8NEY1 1877 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 MYH8P13535 1937 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 EGFRP00533 1210 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 HSPA6P17066 643 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 IREB2P48200 963 aaKnown RBP10.15□□□□□ -0.78
PDGFC-205ENST00000506880 GRIK5Q16478 980 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 RBM26Q5T8P6 1007 aaKnown RBP10.15□□□□□ -0.78
PDGFC-205ENST00000506880 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.78
PDGFC-205ENST00000506880 DIAPH3Q9NSV4 1193 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
PDGFC-205ENST00000506880 SWAP70Q9UH65 585 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 MKRN1Q9UHC7 482 aaKnown RBP10.15□□□□□ -0.78
PDGFC-205ENST00000506880 JAG2Q9Y219 1238 aa10.15□□□□□ -0.78
PDGFC-205ENST00000506880 SHTN1A0MZ66 631 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 PATL2C9JE40 543 aaKnown RBP10.14□□□□□ -0.79
PDGFC-205ENST00000506880 SLC3A2P08195 630 aaKnown RBP10.14□□□□□ -0.79
PDGFC-205ENST00000506880 SDSP20132 328 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 PDE4AP27815 886 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 ECE1P42892 770 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 OTUD7AQ8TE49 926 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-205ENST00000506880 CCDC102AQ96A19 550 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 CDCA5Q96FF9 252 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 TEPSINQ96N21 525 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 STRBPQ96SI9 672 aaKnown RBP10.14□□□□□ -0.79
PDGFC-205ENST00000506880 ZNF341Q9BYN7 854 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 GBA2Q9HCG7 927 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-205ENST00000506880 AATFQ9NY61 560 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDGFC-205ENST00000506880 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 CTNNA3Q9UI47 895 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 ZNF112Q9UJU3 913 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 CNTNAP1P78357 1384 aa10.14□□□□□ -0.79
PDGFC-205ENST00000506880 FLT1P17948 1338 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 RASSF10A6NK89 507 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 GPAA1O43292 621 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 USP5P45974 858 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 RGS3P49796 1198 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 NOL9Q5SY16 702 aaKnown RBP10.13□□□□□ -0.79
PDGFC-205ENST00000506880 MAP1SQ66K74 1059 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-205ENST00000506880 USP48Q86UV5 1035 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 ANKRD13AQ8IZ07 590 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 CCDC17Q96LX7 622 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 DSCC1Q9BVC3 393 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 SYNPO2Q9UMS6 1093 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 TLL2Q9Y6L7 1015 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 ROBO3Q96MS0 1386 aa10.13□□□□□ -0.79
PDGFC-205ENST00000506880 LAMA4Q16363 1823 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 BAZ2AQ9UIF9 1905 aaKnown RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 CTNND1O60716 968 aaKnown RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 MBD4O95243 580 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 CELF2O95319 508 aaKnown RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 ZBTB48P10074 688 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 INHBEP58166 350 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 LDLRAD1Q5T700 205 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 SAPCD2Q86UD0 394 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 SH3RF3Q8TEJ3 882 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 OSBP2Q969R2 916 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 RILPL2Q969X0 211 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 CSRNP1Q96S65 589 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 GLIS2Q9BZE0 524 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 ZCCHC17Q9NP64 241 aaKnown RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 DCP1AQ9NPI6 582 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-205ENST00000506880 SERPINB13Q9UIV8 391 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 ANAPC4Q9UJX5 808 aa10.12□□□□□ -0.79
PDGFC-205ENST00000506880 DOCK1Q14185 1865 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 POTEJP0CG39 1038 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 GSPT1P15170 499 aaKnown RBP10.11□□□□□ -0.79
PDGFC-205ENST00000506880 MAP2K2P36507 400 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 ADGRA1Q86SQ6 560 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 ZSCAN29Q8IWY8 852 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-205ENST00000506880 TGFBRAP1Q8WUH2 860 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 KLRG1Q96E93 195 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 TRIM34Q9BYJ4 488 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 PUS7LQ9H0K6 701 aaKnown RBP10.11□□□□□ -0.79
PDGFC-205ENST00000506880 CSADQ9Y600 493 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 THSD7BQ9C0I4 1608 aa10.11□□□□□ -0.79
PDGFC-205ENST00000506880 CDC45O75419 566 aa10.1□□□□□ -0.79
PDGFC-205ENST00000506880 ASNSP08243 561 aa10.1□□□□□ -0.79
PDGFC-205ENST00000506880 CHMLP26374 656 aa10.1□□□□□ -0.79
PDGFC-205ENST00000506880 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
PDGFC-205ENST00000506880 GABPAQ06546 454 aa10.1□□□□□ -0.79
PDGFC-205ENST00000506880 NFIAQ12857 509 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms