RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 CLCN6P51797 869 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 ATP2B2Q01814 1243 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 EXOSC9Q06265 439 aaKnown RBP6.22□□□□□ -1.41
CPNE4-207ENST00000506687 PROSER3Q2NL68 480 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 RNF19BQ6ZMZ0 732 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 USB1Q9BQ65 265 aaKnown RBP6.22□□□□□ -1.41
CPNE4-207ENST00000506687 PRKD2Q9BZL6 878 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 TAOK3Q9H2K8 898 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 MYH16Q9H6N6 1097 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 SEPT9Q9UHD8 586 aaPredicted RBP6.22□□□□□ -1.41
CPNE4-207ENST00000506687 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 ZBED9Q6R2W3 1325 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 TIAM2Q8IVF5 1701 aa6.22□□□□□ -1.41
CPNE4-207ENST00000506687 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 ELL2O00472 640 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 STK10O94804 968 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 CAMTA2O94983 1202 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 EIF2S2P20042 333 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 TM4SF1P30408 202 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 PIP4K2AP48426 406 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 TWISTNBQ3B726 338 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 KMT5BQ4FZB7 885 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 ZNF394Q53GI3 561 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 RNF187Q5TA31 235 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 TMED8Q6PL24 325 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 BLOC1S3Q6QNY0 202 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 ARHGAP9Q9BRR9 750 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 NARFQ9UHQ1 456 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 NOP58Q9Y2X3 529 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 PCDHGB7Q9Y5F8 929 aa6.21□□□□□ -1.42
CPNE4-207ENST00000506687 MRPL42Q9Y6G3 142 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 USP42Q9H9J4 1324 aaKnown RBP6.21□□□□□ -1.42
CPNE4-207ENST00000506687 CACNA1FO60840 1977 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 COL15A1P39059 1388 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 SBF1O95248 1867 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 A0A087WZG4 1122 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 H0YIN7 160 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 TPD52L2O43399 206 aaKnown RBP6.2□□□□□ -1.42
CPNE4-207ENST00000506687 ANXA1P04083 346 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 USPL1Q5W0Q7 1092 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 TTLL7Q6ZT98 887 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 ZBTB33Q86T24 672 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 ARMC2Q8NEN0 867 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 UBE2Q2Q8WVN8 375 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 COL26A1Q96A83 441 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 DMRTB1Q96MA1 342 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 CITED4Q96RK1 184 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 CHPF2Q9P2E5 772 aa6.2□□□□□ -1.42
CPNE4-207ENST00000506687 DBF4Q9UBU7 674 aaPredicted RBP6.2□□□□□ -1.42
CPNE4-207ENST00000506687 SRP68Q9UHB9 627 aaKnown RBP6.2□□□□□ -1.42
CPNE4-207ENST00000506687 ERVV-1B6SEH8 477 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 PARNO95453 639 aaKnown RBP6.19□□□□□ -1.42
CPNE4-207ENST00000506687 HSD3B2P26439 372 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 RACK1P63244 317 aaKnown RBP6.19□□□□□ -1.42
CPNE4-207ENST00000506687 HLFQ16534 295 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 PTPRNQ16849 979 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 CCDC181Q5TID7 509 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 CCDC30Q5VVM6 783 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 GPR153Q6NV75 609 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 CLEC4GQ6UXB4 293 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 COPS6Q7L5N1 327 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 SAMD7Q7Z3H4 446 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 MCF2L2Q86YR7 1114 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 C2CD5Q86YS7 1000 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 ZNF654Q8IZM8 581 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 GPKOWQ92917 476 aaPredicted RBP eCLIP6.19□□□□□ -1.42
CPNE4-207ENST00000506687 OTUD5Q96G74 571 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 KCNK17Q96T54 332 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 CYLDQ9NQC7 956 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 HYPKQ9NX55 129 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 RNF186Q9NXI6 227 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 DDX41Q9UJV9 622 aaKnown RBP6.19□□□□□ -1.42
CPNE4-207ENST00000506687 RNF123Q5XPI4 1314 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 MAP3K15Q6ZN16 1313 aa6.19□□□□□ -1.42
CPNE4-207ENST00000506687 ADAMTSL1Q8N6G6 1762 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 TRAF5O00463 557 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 GPR182O15218 404 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 ZPR1O75312 459 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 TRPA1O75762 1119 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 GABBR2O75899 941 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 CELF2O95319 508 aaKnown RBP6.18□□□□□ -1.42
CPNE4-207ENST00000506687 CT47B1P0C2W7 299 aaPredicted RBP6.18□□□□□ -1.42
CPNE4-207ENST00000506687 MYL6BP14649 208 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 JUNDP17535 347 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 NFIXQ14938 502 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 DOK7Q18PE1 504 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 FBXO46Q6PJ61 603 aaPredicted RBP6.18□□□□□ -1.42
CPNE4-207ENST00000506687 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 G2E3Q7L622 706 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 ZNF34Q8IZ26 560 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPNE4-207ENST00000506687 XAGE3Q8WTP9 111 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 SLC39A7Q92504 469 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 MRFAP1L1Q96HT8 127 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 ZIC5Q96T25 663 aa6.18□□□□□ -1.42
CPNE4-207ENST00000506687 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms