RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 DNAJC18Q9H819 358 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 RRAGCQ9HB90 399 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 DCP1AQ9NPI6 582 aaPredicted RBP10□□□□□ -0.81
CDC42SE2-208ENST00000505065 NID2Q14112 1375 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 IGKV6D-41A0A0C4DH26 115 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 FBXL16Q8N461 479 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
CDC42SE2-208ENST00000505065 CHAF1AQ13111 956 aaPredicted RBP10□□□□□ -0.81
CDC42SE2-208ENST00000505065 GINM1Q9NU53 330 aa10□□□□□ -0.81
CDC42SE2-208ENST00000505065 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
CDC42SE2-208ENST00000505065 DNAJC2Q99543 621 aaKnown RBP10□□□□□ -0.81
CDC42SE2-208ENST00000505065 POTEIP0CG38 1075 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 POTEJP0CG39 1038 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 CYP7A1P22680 504 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 DYNLL1P63167 89 aaKnown RBP9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 LDLRAD1Q5T700 205 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 GPAA1O43292 621 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 FKBP1BP68106 108 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 NFIAQ12857 509 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 DLGAP5Q15398 846 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 DZIP1Q86YF9 867 aaKnown RBP9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 LRP2BPQ9P2M1 347 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 CDC45O75419 566 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 NECTIN1Q15223 517 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 ZFPM1Q8IX07 1006 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 JAG2Q9Y219 1238 aa9.99□□□□□ -0.81
CDC42SE2-208ENST00000505065 HSPD1P10809 573 aaKnown RBP9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 LMOD1P29536 600 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 SEC62Q99442 399 aaKnown RBP9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 DHX36Q9H2U1 1008 aaKnown RBP9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 CTR9Q6PD62 1173 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 C16orf86Q6ZW13 317 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 OGFOD1Q8N543 542 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 SYNPO2Q9UMS6 1093 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 GJA3Q9Y6H8 435 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 TOMM70O94826 608 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 BAG3O95817 575 aa9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 PCP11498 1178 aaKnown RBP9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 TDRD3Q9H7E2 651 aaKnown RBP9.98□□□□□ -0.81
CDC42SE2-208ENST00000505065 TBC1D10BQ4KMP7 808 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 CST9Q5W186 159 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 GGA3Q9NZ52 723 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 ARPP21Q9UBL0 812 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 MBD4O95243 580 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 ANGEL2Q5VTE6 544 aaKnown RBP9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 FSD1Q9BTV5 496 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 USP40Q9NVE5 1235 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 RAI14Q9P0K7 980 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 DDTLA6NHG4 134 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 ORC4O43929 436 aa9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 AATFQ9NY61 560 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDC42SE2-208ENST00000505065 G3V3G9 751 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 IDH1O75874 414 aaKnown RBP9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 DCAF8Q5TAQ9 597 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 VPS53Q5VIR6 699 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 IFNL3Q8IZI9 196 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 STAG1Q8WVM7 1258 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 TCP11L1Q9NUJ3 509 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 ABCF2Q9UG63 623 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 HERC5Q9UII4 1024 aaKnown RBP9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 MYH15Q9Y2K3 1946 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 RGS3P49796 1198 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 TNFAIP1Q13829 316 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 SMC1BQ8NDV3 1235 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 ANKS1AQ92625 1134 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 MTA3Q9BTC8 594 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 ARMT1Q9H993 441 aa9.96□□□□□ -0.81
CDC42SE2-208ENST00000505065 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 RRP1BQ14684 758 aaKnown RBP9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 CDCA5Q96FF9 252 aa9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 ALDH8A1Q9H2A2 487 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 TESPA1A2RU30 521 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 YY1P25490 414 aa9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 SHMT1P34896 483 aa9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 CDC37L1Q7L3B6 337 aa9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 CRNKL1Q9BZJ0 848 aaKnown RBP9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 DEFB129Q9H1M3 183 aa9.96□□□□□ -0.82
CDC42SE2-208ENST00000505065 MYH6P13533 1939 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 PRKAB2O43741 272 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 USP2O75604 605 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 GUCY1A2P33402 732 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 PTH1RQ03431 593 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 CDAN1Q8IWY9 1227 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 MOGSQ13724 837 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 AGXT2Q9BYV1 514 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 FAM155AB1AL88 458 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 HSPA4P34932 840 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 KLRG1Q96E93 195 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 USP26Q9BXU7 913 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 SWAP70Q9UH65 585 aa9.95□□□□□ -0.82
CDC42SE2-208ENST00000505065 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms