RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 GPBAR1Q8TDU6 330 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 ATXN3LQ9H3M9 355 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 ANGEL1Q9UNK9 670 aaKnown RBP8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 FBXO24O75426 580 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 MAPK8P45983 427 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 CYP27A1Q02318 531 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 MAP1SQ66K74 1059 aaPredicted RBP8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 SPRED2Q7Z698 418 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 ISL2Q96A47 359 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 ASB16Q96NS5 453 aa8.84□□□□□ -0.99
DEPDC1B-203ENST00000505017 TPTE2Q6XPS3 522 aa8.83□□□□□ -1
DEPDC1B-203ENST00000505017 ZNF574Q6ZN55 896 aaPredicted RBP8.83□□□□□ -1
DEPDC1B-203ENST00000505017 UBE3DQ7Z6J8 389 aa8.83□□□□□ -1
DEPDC1B-203ENST00000505017 FAM181AQ8N9Y4 354 aa8.83□□□□□ -1
DEPDC1B-203ENST00000505017 BCL7CQ8WUZ0 217 aaPredicted RBP8.83□□□□□ -1
DEPDC1B-203ENST00000505017 PPP4R2Q9NY27 417 aa8.83□□□□□ -1
DEPDC1B-203ENST00000505017 MYO15BQ96JP2 1530 aa8.83□□□□□ -1
DEPDC1B-203ENST00000505017 PAX4O43316 350 aa8.82□□□□□ -1
DEPDC1B-203ENST00000505017 PLD6Q8N2A8 252 aaKnown RBP8.82□□□□□ -1
DEPDC1B-203ENST00000505017 PIDD1Q9HB75 910 aa8.82□□□□□ -1
DEPDC1B-203ENST00000505017 GOLGA2P5Q9HBQ8 144 aa8.82□□□□□ -1
DEPDC1B-203ENST00000505017 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
DEPDC1B-203ENST00000505017 RING1Q06587 406 aa8.81□□□□□ -1
DEPDC1B-203ENST00000505017 FBF1Q8TES7 1133 aa8.81□□□□□ -1
DEPDC1B-203ENST00000505017 FBXL18Q96ME1 805 aa8.81□□□□□ -1
DEPDC1B-203ENST00000505017 DUSP23Q9BVJ7 150 aa8.81□□□□□ -1
DEPDC1B-203ENST00000505017 RNGTTO60942 597 aaKnown RBP8.8□□□□□ -1
DEPDC1B-203ENST00000505017 GSTT1P30711 240 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 ERVK-24P63145 666 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 TP53INP2Q8IXH6 220 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 FLCNQ8NFG4 579 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 KRTAP9-9Q9BYP9 154 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 KRTAP9-4Q9BYQ2 154 aa8.8□□□□□ -1
DEPDC1B-203ENST00000505017 KCNA1Q09470 495 aa8.79□□□□□ -1
DEPDC1B-203ENST00000505017 BNIP3Q12983 259 aa8.79□□□□□ -1
DEPDC1B-203ENST00000505017 RNF214Q8ND24 703 aa8.79□□□□□ -1
DEPDC1B-203ENST00000505017 RNF19AQ9NV58 838 aa8.79□□□□□ -1
DEPDC1B-203ENST00000505017 PCOLCE2Q9UKZ9 415 aa8.79□□□□□ -1
DEPDC1B-203ENST00000505017 CSADQ9Y600 493 aa8.79□□□□□ -1
DEPDC1B-203ENST00000505017 RBAK-RBAKDNI3L0D1 243 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 CELA3AP09093 270 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 ITGB5P18084 799 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 CD96P40200 585 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
DEPDC1B-203ENST00000505017 PPM1JQ5JR12 505 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 ANKRD24Q8TF21 1146 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 HEXIM2Q96MH2 286 aaKnown RBP8.78□□□□□ -1
DEPDC1B-203ENST00000505017 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 RNF114Q9Y508 228 aa8.78□□□□□ -1
DEPDC1B-203ENST00000505017 CYP27C1Q4G0S4 372 aa8.77□□□□□ -1.01
DEPDC1B-203ENST00000505017 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
DEPDC1B-203ENST00000505017 EMILIN2Q9BXX0 1053 aa8.77□□□□□ -1.01
DEPDC1B-203ENST00000505017 SRCIN1Q9C0H9 1055 aa8.77□□□□□ -1.01
DEPDC1B-203ENST00000505017 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
DEPDC1B-203ENST00000505017 PPM1HQ9ULR3 514 aa8.77□□□□□ -1.01
DEPDC1B-203ENST00000505017 DCDC2CA8MYV0 355 aa8.76□□□□□ -1.01
DEPDC1B-203ENST00000505017 OXCT1P55809 520 aa8.76□□□□□ -1.01
DEPDC1B-203ENST00000505017 ALG1LQ6GMV1 187 aa8.76□□□□□ -1.01
DEPDC1B-203ENST00000505017 C12orf40Q86WS4 652 aa8.76□□□□□ -1.01
DEPDC1B-203ENST00000505017 TRIM37O94972 964 aa8.75□□□□□ -1.01
DEPDC1B-203ENST00000505017 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.75□□□□□ -1.01
DEPDC1B-203ENST00000505017 TOP6BLQ8N6T0 577 aa8.75□□□□□ -1.01
DEPDC1B-203ENST00000505017 C12orf49Q9H741 205 aa8.75□□□□□ -1.01
DEPDC1B-203ENST00000505017 SLC5A6Q9Y289 635 aa8.75□□□□□ -1.01
DEPDC1B-203ENST00000505017 CD8BP10966 210 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 NETO1Q8TDF5 533 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 ACSBG1Q96GR2 724 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 CEP44Q9C0F1 390 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 ADAMTS6Q9UKP5 1117 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 ABCC9O60706 1549 aa8.74□□□□□ -1.01
DEPDC1B-203ENST00000505017 GIPC1O14908 333 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 USP17L7P0C7H9 530 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 INPP5AQ14642 412 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 PCNX4Q63HM2 1172 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 NACADO15069 1562 aa8.73□□□□□ -1.01
DEPDC1B-203ENST00000505017 PAPLNO95428 1278 aa8.72□□□□□ -1.01
DEPDC1B-203ENST00000505017 CDK8P49336 464 aa8.72□□□□□ -1.01
DEPDC1B-203ENST00000505017 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.72□□□□□ -1.01
DEPDC1B-203ENST00000505017 AGBL5Q8NDL9 886 aa8.72□□□□□ -1.01
DEPDC1B-203ENST00000505017 GAL3ST3Q96A11 431 aa8.72□□□□□ -1.01
DEPDC1B-203ENST00000505017 LDHBP07195 334 aaKnown RBP8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 TXKP42681 527 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 ZNF792Q3KQV3 632 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 TNKS2Q9H2K2 1166 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 MKNK2Q9HBH9 465 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 FAM8A1Q9UBU6 413 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 PCDHA4Q9UN74 947 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 CNTNAP4Q9C0A0 1308 aa8.71□□□□□ -1.02
DEPDC1B-203ENST00000505017 CEACAM5P06731 702 aa8.7□□□□□ -1.02
DEPDC1B-203ENST00000505017 FUT4P22083 530 aa8.7□□□□□ -1.02
DEPDC1B-203ENST00000505017 FBRSQ9HAH7 460 aa8.7□□□□□ -1.02
DEPDC1B-203ENST00000505017 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
DEPDC1B-203ENST00000505017 MBNL3Q9NUK0 354 aaKnown RBP8.7□□□□□ -1.02
DEPDC1B-203ENST00000505017 SPG7Q9UQ90 795 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms