RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 UVSSAQ2YD98 709 aa8.57□□□□□ -1.04
COPS4-203ENST00000504274 SCARA3Q6AZY7 606 aa8.57□□□□□ -1.04
COPS4-203ENST00000504274 LRFN4Q6PJG9 635 aa8.57□□□□□ -1.04
COPS4-203ENST00000504274 BNC2Q6ZN30 1099 aaPredicted RBP8.57□□□□□ -1.04
COPS4-203ENST00000504274 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
COPS4-203ENST00000504274 JARID2Q92833 1246 aaPredicted RBP8.57□□□□□ -1.04
COPS4-203ENST00000504274 FANCD2OSQ96PS1 177 aa8.57□□□□□ -1.04
COPS4-203ENST00000504274 MIR1-1HGQ9H1L0 117 aa8.57□□□□□ -1.04
COPS4-203ENST00000504274 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
COPS4-203ENST00000504274 LMNB1P20700 586 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 GARTP22102 1010 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 ASPAP45381 313 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 ZNF394Q53GI3 561 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 PRR23CQ6ZRP0 262 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 C12orf40Q86WS4 652 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 TRIM42Q8IWZ5 723 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 RNF34Q969K3 372 aa8.56□□□□□ -1.04
COPS4-203ENST00000504274 DHX15O43143 795 aaKnown RBP8.55□□□□□ -1.04
COPS4-203ENST00000504274 USP11P51784 963 aa8.55□□□□□ -1.04
COPS4-203ENST00000504274 PWP1Q13610 501 aa8.55□□□□□ -1.04
COPS4-203ENST00000504274 PLPPR2Q96GM1 343 aa8.55□□□□□ -1.04
COPS4-203ENST00000504274 ADAMTS1Q9UHI8 967 aa8.55□□□□□ -1.04
COPS4-203ENST00000504274 HIF3AQ9Y2N7 669 aa8.55□□□□□ -1.04
COPS4-203ENST00000504274 PCDHGB7Q9Y5F8 929 aa8.55□□□□□ -1.04
COPS4-203ENST00000504274 F13A1P00488 732 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 NEFMP07197 916 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 RAB6AP20340 208 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 MAP4P27816 1152 aaKnown RBP8.54□□□□□ -1.04
COPS4-203ENST00000504274 TTLL4Q14679 1199 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 PPM1JQ5JR12 505 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 FBXL19Q6PCT2 694 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 BEND4Q6ZU67 534 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 ACSS3Q9H6R3 686 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 RAXQ9Y2V3 346 aa8.54□□□□□ -1.04
COPS4-203ENST00000504274 HMX2A2RU54 273 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 FAM221AA4D161 298 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 DYRK3O43781 588 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 NFICP08651 508 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
COPS4-203ENST00000504274 RXRBP28702 533 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 ERVK-24P63145 666 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 RACK1P63244 317 aaKnown RBP8.53□□□□□ -1.04
COPS4-203ENST00000504274 RING1Q06587 406 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 WIPI1Q5MNZ9 446 aaPredicted RBP8.53□□□□□ -1.04
COPS4-203ENST00000504274 GOLM1Q8NBJ4 401 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 FBXO27Q8NI29 283 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 C7orf69Q9H7B7 122 aa8.53□□□□□ -1.04
COPS4-203ENST00000504274 GFRA2O00451 464 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 NTF4P34130 210 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 EIF4A3P38919 411 aaKnown RBP8.52□□□□□ -1.05
COPS4-203ENST00000504274 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.05
COPS4-203ENST00000504274 SNAP47Q5SQN1 464 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 CYFIP1Q7L576 1253 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 UBE3DQ7Z6J8 389 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
COPS4-203ENST00000504274 USP48Q86UV5 1035 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 CLEC10AQ8IUN9 316 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 EZH1Q92800 747 aaPredicted RBP8.52□□□□□ -1.05
COPS4-203ENST00000504274 ELMO3Q96BJ8 720 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 FAM83CQ9BQN1 747 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 SEMA6CQ9H3T2 930 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 STOML1Q9UBI4 398 aa8.52□□□□□ -1.05
COPS4-203ENST00000504274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.51□□□□□ -1.05
COPS4-203ENST00000504274 E9PSI1 815 aa8.51□□□□□ -1.05
COPS4-203ENST00000504274 DYNC1LI2O43237 492 aaPredicted RBP8.51□□□□□ -1.05
COPS4-203ENST00000504274 GREM1O60565 184 aa8.51□□□□□ -1.05
COPS4-203ENST00000504274 CILPO75339 1184 aa8.51□□□□□ -1.05
COPS4-203ENST00000504274 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
COPS4-203ENST00000504274 ZNF296Q8WUU4 475 aaPredicted RBP8.51□□□□□ -1.05
COPS4-203ENST00000504274 GATAD2BQ8WXI9 593 aa8.51□□□□□ -1.05
COPS4-203ENST00000504274 DDX41Q9UJV9 622 aaKnown RBP8.51□□□□□ -1.05
COPS4-203ENST00000504274 FAM95CA0A1B0GW59 222 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 PRAMEF27A3QJZ7 478 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 RNGTTO60942 597 aaKnown RBP8.5□□□□□ -1.05
COPS4-203ENST00000504274 ITGB7P26010 798 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 ZBTB37Q5TC79 503 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 HDXQ7Z353 690 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 SHISA5Q8N114 240 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 RNF214Q8ND24 703 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 ISL2Q96A47 359 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 SEMA6BQ9H3T3 888 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 PIDD1Q9HB75 910 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 DAGLAQ9Y4D2 1042 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 SNCAIPQ9Y6H5 919 aa8.5□□□□□ -1.05
COPS4-203ENST00000504274 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
COPS4-203ENST00000504274 RPL6Q02878 288 aaKnown RBP8.49□□□□□ -1.05
COPS4-203ENST00000504274 NFKBIBQ15653 356 aa8.49□□□□□ -1.05
COPS4-203ENST00000504274 SEZ6L2Q6UXD5 910 aa8.49□□□□□ -1.05
COPS4-203ENST00000504274 FAM196AQ6ZSG2 479 aa8.49□□□□□ -1.05
COPS4-203ENST00000504274 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
COPS4-203ENST00000504274 TCF3P15923 654 aa8.48□□□□□ -1.05
COPS4-203ENST00000504274 CRKP46108 304 aa8.48□□□□□ -1.05
COPS4-203ENST00000504274 RAD51AP2Q09MP3 1159 aa8.48□□□□□ -1.05
COPS4-203ENST00000504274 EAF1Q96JC9 268 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms