RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TMEM87AQ8NBN3 555 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 DDX11Q96FC9 970 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 SGIP1Q9BQI5 828 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 NOL10Q9BSC4 688 aaKnown RBP25.81■■□□□ 1.72
PTPN13-205ENST00000502971 ZC3H12CQ9C0D7 883 aaKnown RBP25.81■■□□□ 1.72
PTPN13-205ENST00000502971 LY9Q9HBG7 655 aa25.81■■□□□ 1.72
PTPN13-205ENST00000502971 DCP1AQ9NPI6 582 aaPredicted RBP25.81■■□□□ 1.72
PTPN13-205ENST00000502971 IFIT3O14879 490 aaKnown RBP25.8■■□□□ 1.72
PTPN13-205ENST00000502971 SBK1Q52WX2 424 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 TOMM22Q9NS69 142 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 ARPP21Q9UBL0 812 aaPredicted RBP25.8■■□□□ 1.72
PTPN13-205ENST00000502971 MROH7-TTC4A0A0A0MT08 1334 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 FGRP09769 529 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 RRP12Q5JTH9 1297 aaKnown RBP25.8■■□□□ 1.72
PTPN13-205ENST00000502971 SLF2Q8IX21 1173 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 ESR2Q92731 530 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 EYA3Q99504 573 aa25.8■■□□□ 1.72
PTPN13-205ENST00000502971 GRIK5Q16478 980 aa25.79■■□□□ 1.72
PTPN13-205ENST00000502971 TMTC2Q8N394 836 aa25.79■■□□□ 1.72
PTPN13-205ENST00000502971 GZF1Q9H116 711 aaPredicted RBP25.79■■□□□ 1.72
PTPN13-205ENST00000502971 USP17L12C9JPN9 530 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 USP17L21D6R901 530 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 H3BQV1 296 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 CSPP1Q1MSJ5 1256 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 FOXD4L6Q3SYB3 417 aaPredicted RBP25.78■■□□□ 1.72
PTPN13-205ENST00000502971 MFSD14BQ5SR56 506 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 IFFO2Q5TF58 517 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 APOA5Q6Q788 366 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 FOXD4L3Q6VB84 417 aaPredicted RBP25.78■■□□□ 1.72
PTPN13-205ENST00000502971 NFXL1Q6ZNB6 911 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 CNKSR1Q969H4 720 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 SRCAPQ6ZRS2 3230 aa25.78■■□□□ 1.72
PTPN13-205ENST00000502971 ERICH2A1L162 156 aa25.77■■□□□ 1.72
PTPN13-205ENST00000502971 RIMBP2O15034 1052 aa25.77■■□□□ 1.72
PTPN13-205ENST00000502971 MBD3O95983 291 aa25.77■■□□□ 1.72
PTPN13-205ENST00000502971 SLC3A2P08195 630 aaKnown RBP25.77■■□□□ 1.72
PTPN13-205ENST00000502971 FAM163AQ96GL9 167 aaPredicted RBP25.77■■□□□ 1.72
PTPN13-205ENST00000502971 SUGT1Q9Y2Z0 365 aa25.77■■□□□ 1.72
PTPN13-205ENST00000502971 CPLX1O14810 134 aa25.77■■□□□ 1.72
PTPN13-205ENST00000502971 METAP2P50579 478 aaKnown RBP eCLIP25.77■■□□□ 1.72
PTPN13-205ENST00000502971 DIXDC1Q155Q3 683 aa25.77■■□□□ 1.72
PTPN13-205ENST00000502971 BAZ2AQ9UIF9 1905 aaKnown RBP25.77■■□□□ 1.72
PTPN13-205ENST00000502971 CCDC69A6NI79 296 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 ZBTB43O43298 467 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 PTGER2P43116 358 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 TGFB2P61812 414 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 WTAPQ15007 396 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 OLFM4Q6UX06 510 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 USP48Q86UV5 1035 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 RTFDC1Q9BY42 306 aaPredicted RBP25.76■■□□□ 1.71
PTPN13-205ENST00000502971 CNPY2Q9Y2B0 182 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
PTPN13-205ENST00000502971 GPR75-ASB3A0A0A6YYF3 556 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 NCLP19338 710 aaKnown RBP25.75■■□□□ 1.71
PTPN13-205ENST00000502971 NT5C2P49902 561 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 SYNE3Q6ZMZ3 975 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 STK11IPQ8N1F8 1099 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 ZSCAN16Q9H4T2 348 aaPredicted RBP25.75■■□□□ 1.71
PTPN13-205ENST00000502971 SPON1Q9HCB6 807 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 MKRN1Q9UHC7 482 aaKnown RBP25.75■■□□□ 1.71
PTPN13-205ENST00000502971 SLC12A7Q9Y666 1083 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 LAMB1P07942 1786 aa25.75■■□□□ 1.71
PTPN13-205ENST00000502971 CYP2D7A0A087X1C5 515 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 ORC4O43929 436 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 CDKL5O76039 1030 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 USP5P45974 858 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 GTF2IP78347 998 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 CPLX2Q6PUV4 134 aaKnown RBP25.74■■□□□ 1.71
PTPN13-205ENST00000502971 RGS22Q8NE09 1264 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 GPT2Q8TD30 523 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 SH3RF3Q8TEJ3 882 aaPredicted RBP25.74■■□□□ 1.71
PTPN13-205ENST00000502971 UBAC1Q9BSL1 405 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 SENP2Q9HC62 589 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 NID2Q14112 1375 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 DLEC1Q9Y238 1755 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 FDPSP14324 419 aaKnown RBP25.74■■□□□ 1.71
PTPN13-205ENST00000502971 PLCG2P16885 1265 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 RCAN1P53805 252 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 DNM1Q05193 864 aaKnown RBP25.74■■□□□ 1.71
PTPN13-205ENST00000502971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.74■■□□□ 1.71
PTPN13-205ENST00000502971 MYH2Q9UKX2 1941 aa25.74■■□□□ 1.71
PTPN13-205ENST00000502971 FERMT3Q86UX7 667 aa25.73■■□□□ 1.71
PTPN13-205ENST00000502971 GDPD2Q9HCC8 539 aa25.73■■□□□ 1.71
PTPN13-205ENST00000502971 MCM9Q9NXL9 1143 aa25.73■■□□□ 1.71
PTPN13-205ENST00000502971 CD2APQ9Y5K6 639 aa25.73■■□□□ 1.71
PTPN13-205ENST00000502971 GAKO14976 1311 aa25.73■■□□□ 1.71
PTPN13-205ENST00000502971 BTDP43251 543 aa25.72■■□□□ 1.71
PTPN13-205ENST00000502971 KRT85P78386 507 aa25.72■■□□□ 1.71
PTPN13-205ENST00000502971 RESTQ13127 1097 aa25.72■■□□□ 1.71
PTPN13-205ENST00000502971 RAB11FIP4Q86YS3 637 aa25.72■■□□□ 1.71
PTPN13-205ENST00000502971 G3V3G9 751 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 CHRNA5P30532 468 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 DCAF8Q5TAQ9 597 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 MICU3Q86XE3 530 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 AMOTL1Q8IY63 956 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 ORC3Q9UBD5 711 aaPredicted RBP25.71■■□□□ 1.71
PTPN13-205ENST00000502971 GOLGA8AA7E2F4 631 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 SMIM22K7EJ46 135 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 PDE4BQ07343 736 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 CC2D2BQ6DHV5 1058 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms