RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 KIF23Q02241 960 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 POTEEQ6S8J3 1075 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 LMBR1Q8WVP7 490 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.32□□□□□ -1.562e-16■□□□□ 9.6
NEAT1-202ENST00000501122 CNGA1P29973 690 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 KRT83P78385 493 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 CHD1LQ86WJ1 897 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 ZNF710Q8N1W2 664 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 SH2B1Q9NRF2 756 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 ATP11BQ9Y2G3 1177 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 ANGPTL3Q9Y5C1 460 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 GNAT1P11488 350 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 RBM5P52756 815 aaKnown RBP eCLIP5.32□□□□□ -1.561e-45■□□□□ 10.2
NEAT1-202ENST00000501122 HELBQ8NG08 1087 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 CLMNQ96JQ2 1002 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 VCPKMTQ9H867 229 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 TBC1D23Q9NUY8 699 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 INTUQ9ULD6 942 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 LONRF3Q496Y0 759 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 NBPF14Q5TI25 921 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 VPS36Q86VN1 386 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 RFWD2Q8NHY2 731 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 NRBF2Q96F24 287 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 BZW2Q9Y6E2 419 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 POTEB3A0JP26 581 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 PDE6BP35913 854 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 POTEBQ6S5H4 581 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 GOLGA8AA7E2F4 631 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 GOLGA8BA8MQT2 603 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 RNF40O75150 1001 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 ATP6V1E1P36543 226 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 CCDC85AQ96PX6 553 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 C6orf118Q5T5N4 469 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 TUBA3EQ6PEY2 450 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 SND1Q7KZF4 910 aaKnown RBP eCLIP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 GDAP1L1Q96MZ0 367 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 DKC1O60832 514 aaKnown RBP eCLIP5.32□□□□□ -1.561e-26■■■■■ 37.1
NEAT1-202ENST00000501122 TEX13AQ9BXU3 409 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 SUN1O94901 812 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 STAT2P52630 851 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 NCBP1Q09161 790 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 KARSQ15046 597 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 SPINK5Q9NQ38 1064 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 LARP1Q6PKG0 1096 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 ZCCHC17Q9NP64 241 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 RWDD3Q9Y3V2 267 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 ZSCAN25Q6NSZ9 544 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 PRPF40BQ6NWY9 871 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 KRT14P02533 472 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 KLHL29Q96CT2 875 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 PCP4L1A6NKN8 68 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 RCSD1Q6JBY9 416 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 UBLCP1Q8WVY7 318 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 OCA2Q04671 838 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 NAPGQ99747 312 aaPredicted RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 PSEN1P49768 467 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 BICC1Q9H694 974 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 HDAC9Q9UKV0 1011 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 IFIT2P09913 472 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 EEF2P13639 858 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 KRT10P13645 584 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PDE1BQ01064 536 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 HNRNPCL2B2RXH8 293 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 HNRNPCL1O60812 293 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PMS1P54277 932 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 CALCOCO2Q13137 446 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 FYB2Q5VWT5 728 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 FBXO38Q6PIJ6 1188 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 CCDC26Q8TAB7 109 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PNMA2Q9UL42 364 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 SLC26A4O43511 780 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 MRPS15P82914 257 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 DDHD1Q8NEL9 900 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 LZTFL1Q9NQ48 299 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 TXLNGQ9NUQ3 528 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 ATP1A2P50993 1020 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 TEKT2Q9UIF3 430 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 POTEIP0CG38 1075 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 VPS37AQ8NEZ2 397 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 IL17RAQ96F46 866 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PARD6BQ9BYG5 372 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 POTEFA5A3E0 1075 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 NBPF26B4DH59 902 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 NBPF15Q8N660 670 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 P3H4Q92791 437 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PEX5LQ8IYB4 626 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 BCAR3O75815 825 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 NLRP4Q96MN2 994 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 FERMT1Q9BQL6 677 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 SOGA1O94964 1423 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 STX6O43752 255 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 LONRF2Q1L5Z9 754 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 SWT1Q5T5J6 900 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 TRIM50Q86XT4 487 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 FAM186BQ8IYM0 893 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 MAIP1Q8WWC4 291 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms