RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 UTP14AQ9BVJ6 771 aaKnown RBP19.05■□□□□ 0.64
ZCCHC3-201ENST00000500893 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 CYP2D7A0A087X1C5 515 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 AFMP43652 599 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 GSDMDP57764 484 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 RTN1Q16799 776 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 NACAP1Q9BZK3 213 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 COBLO75128 1261 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 CYP7A1P22680 504 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 CDC25BP30305 580 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 LPIN2Q92539 896 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 EPB41L4AQ9HCS5 686 aaPredicted RBP19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 CABP5Q9NP86 173 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 CPLX3Q8WVH0 158 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 STAMQ92783 540 aa19.04■□□□□ 0.64
ZCCHC3-201ENST00000500893 UQCRFS1P1P0C7P4 283 aa19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 TOP1P11387 765 aaKnown RBP19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 SUSD4Q5VX71 490 aa19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 NIP7Q9Y221 180 aaKnown RBP eCLIP19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 UBN2Q6ZU65 1347 aa19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 CYP19A1P11511 503 aaPredicted RBP19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 ATP6V1AP38606 617 aa19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 STX17P56962 302 aa19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 LY9Q9HBG7 655 aa19.03■□□□□ 0.64
ZCCHC3-201ENST00000500893 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 NKX1-1Q15270 411 aaPredicted RBP19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 UBE3CQ15386 1083 aa19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 CASP1P29466 404 aa19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 GYG1P46976 350 aa19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 IGDCC4Q8TDY8 1250 aa19.02■□□□□ 0.64
ZCCHC3-201ENST00000500893 URI1O94763 535 aaPredicted RBP19.02■□□□□ 0.63
ZCCHC3-201ENST00000500893 MYL5Q02045 173 aa19.02■□□□□ 0.63
ZCCHC3-201ENST00000500893 TRIM28Q13263 835 aaKnown RBP19.02■□□□□ 0.63
ZCCHC3-201ENST00000500893 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.63
ZCCHC3-201ENST00000500893 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 OXER1Q8TDS5 423 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 EVCP57679 992 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 ERCC6LQ2NKX8 1250 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 E4F1Q66K89 784 aaPredicted RBP19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 ZNF771Q7L3S4 317 aaPredicted RBP19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 TMEM87BQ96K49 555 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 VPS54Q9P1Q0 977 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 CPDO75976 1380 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 USP49Q70CQ1 688 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 DHX58Q96C10 678 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 PPP1R13BQ96KQ4 1090 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 PCDHB6Q9Y5E3 794 aa19.01■□□□□ 0.63
ZCCHC3-201ENST00000500893 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
ZCCHC3-201ENST00000500893 FAM205CA6NFA0 338 aa19■□□□□ 0.63
ZCCHC3-201ENST00000500893 KRI1Q8N9T8 703 aaKnown RBP19■□□□□ 0.63
ZCCHC3-201ENST00000500893 SIPA1L3O60292 1781 aaPredicted RBP19■□□□□ 0.63
ZCCHC3-201ENST00000500893 CTIFO43310 598 aaKnown RBP19■□□□□ 0.63
ZCCHC3-201ENST00000500893 NOSTRINQ8IVI9 506 aa19■□□□□ 0.63
ZCCHC3-201ENST00000500893 FBXO3Q9UK99 471 aa19■□□□□ 0.63
ZCCHC3-201ENST00000500893 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 METTL16Q86W50 562 aaKnown RBP18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 FOXP4Q8IVH2 680 aaPredicted RBP18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 CCDC150Q8NCX0 1101 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 LRRN4CLQ8ND94 238 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 RIC1Q4ADV7 1423 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 GSG1L2A8MUP6 293 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 PDE4BQ07343 736 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 NCAPHQ15003 741 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 ANKRD7Q92527 254 aa18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 COL5A2P05997 1499 aaPredicted RBP18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 PHRF1Q9P1Y6 1649 aaKnown RBP18.99■□□□□ 0.63
ZCCHC3-201ENST00000500893 PRR29P0C7W0 189 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 FAM217BQ9NTX9 383 aaPredicted RBP18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 TACC3Q9Y6A5 838 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 SLU7O95391 586 aaKnown RBP18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 KRBA2Q6ZNG9 492 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 KLHL34Q8N239 644 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 ZSWIM4Q9H7M6 989 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 NFE2L3Q9Y4A8 694 aa18.98■□□□□ 0.63
ZCCHC3-201ENST00000500893 SMAP1Q8IYB5 467 aaPredicted RBP18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 SMYD4Q8IYR2 804 aaPredicted RBP18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 VGLL2Q8N8G2 317 aa18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 KRT23Q9C075 422 aa18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 CGNQ9P2M7 1197 aaKnown RBP18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 PLA2G12BQ9BX93 195 aa18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 V9GY48 417 aaPredicted RBP18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 BAZ2BQ9UIF8 2168 aaKnown RBP18.97■□□□□ 0.63
ZCCHC3-201ENST00000500893 PES1O00541 588 aaKnown RBP18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 DYNLL1P63167 89 aaKnown RBP18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 PTPAQ15257 358 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 SMARCE1Q969G3 411 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 DESI2Q9BSY9 194 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 NTRK3Q16288 839 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 ZNF654Q8IZM8 581 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 HOOK1Q9UJC3 728 aaKnown RBP18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 KARSQ15046 597 aaKnown RBP18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 ZNF174Q15697 407 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
ZCCHC3-201ENST00000500893 CUTAO60888 179 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms