RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 PCDH11XQ9BZA7 1347 aa6.44□□□□□ -1.38
SGIP1-214ENST00000497055 PCDH11YQ9BZA8 1340 aa6.44□□□□□ -1.38
SGIP1-214ENST00000497055 CARMIL3Q8ND23 1372 aa6.44□□□□□ -1.38
SGIP1-214ENST00000497055 A0A1W2PPC1 479 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 H3BM21 787 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 GPR25O00155 361 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 ITGA6P23229 1130 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 NOS2P35228 1153 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 PLA2G4AP47712 749 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 SWI5Q1ZZU3 235 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 TMEM164Q5U3C3 297 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 ALYREFQ86V81 257 aaKnown RBP6.43□□□□□ -1.38
SGIP1-214ENST00000497055 STK32AQ8WU08 396 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 SCG3Q8WXD2 468 aaKnown RBP6.43□□□□□ -1.38
SGIP1-214ENST00000497055 RAPGEF4Q8WZA2 1011 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 L3MBTL2Q969R5 705 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 GAS2L1Q99501 681 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-214ENST00000497055 TMOD3Q9NYL9 352 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 LTN1O94822 1766 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 RBBP6Q7Z6E9 1792 aaKnown RBP6.43□□□□□ -1.38
SGIP1-214ENST00000497055 TTC21AQ8NDW8 1320 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 CNTNAP4Q9C0A0 1308 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 ITGB4P16144 1822 aa6.43□□□□□ -1.38
SGIP1-214ENST00000497055 SERTM1A2A2V5 107 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 FZD9O00144 591 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 SERPINB2P05120 415 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 MSX1P28360 303 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 PSMA6P60900 246 aaKnown RBP6.42□□□□□ -1.38
SGIP1-214ENST00000497055 NFIXQ14938 502 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 SOGA3Q5TF21 947 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 USPL1Q5W0Q7 1092 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 USHBP1Q8N6Y0 703 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 ZDHHC1Q8WTX9 485 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 CHMP3Q9Y3E7 222 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 TRIM17Q9Y577 477 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 RPTORQ8N122 1335 aa6.42□□□□□ -1.38
SGIP1-214ENST00000497055 FAM208AQ9UK61 1670 aaKnown RBP6.42□□□□□ -1.38
SGIP1-214ENST00000497055 H7C1W4 665 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 CYP27B1O15528 508 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 PPP1R12BO60237 982 aaPredicted RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 FKTNO75072 461 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 LGR5O75473 907 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 TATP17735 454 aaPredicted RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 IGFBP4P22692 258 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 WEE1P30291 646 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 EIF6P56537 245 aaKnown RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 NFX1Q12986 1120 aaKnown RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 PRPF40BQ6NWY9 871 aaKnown RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 RIPOR1Q6ZS17 1223 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 STAG2Q8N3U4 1231 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 C1orf216Q8TAB5 229 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 NANOS1Q8WY41 292 aaKnown RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 IP6K1Q92551 441 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 GMCL1Q96IK5 515 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 ATG3Q9NT62 314 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 ZNF232Q9UNY5 417 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 CGNL1Q0VF96 1302 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 AFDNP55196 1824 aaKnown RBP6.41□□□□□ -1.38
SGIP1-214ENST00000497055 CD163L1Q9NR16 1453 aa6.41□□□□□ -1.38
SGIP1-214ENST00000497055 LAMA3Q16787 3333 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 WFS1O76024 890 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 FKBP4Q02790 459 aaKnown RBP eCLIP6.4□□□□□ -1.38
SGIP1-214ENST00000497055 SLC4A8Q2Y0W8 1093 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 CCDC93Q567U6 631 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 TREML4Q6UXN2 200 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 DLK2Q6UY11 383 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.4□□□□□ -1.38
SGIP1-214ENST00000497055 TRIM22Q8IYM9 498 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 C2orf69Q8N8R5 385 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 C2orf49Q9BVC5 232 aaPredicted RBP6.4□□□□□ -1.38
SGIP1-214ENST00000497055 GBA2Q9HCG7 927 aaPredicted RBP6.4□□□□□ -1.38
SGIP1-214ENST00000497055 CUEDC1Q9NWM3 386 aaPredicted RBP6.4□□□□□ -1.38
SGIP1-214ENST00000497055 ZDHHC3Q9NYG2 299 aa6.4□□□□□ -1.38
SGIP1-214ENST00000497055 KDRP35968 1356 aa6.4□□□□□ -1.39
SGIP1-214ENST00000497055 WTIPA6NIX2 430 aaPredicted RBP6.39□□□□□ -1.39
SGIP1-214ENST00000497055 EML1O00423 815 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 IARSP41252 1262 aaKnown RBP6.39□□□□□ -1.39
SGIP1-214ENST00000497055 HIRAP54198 1017 aaPredicted RBP6.39□□□□□ -1.39
SGIP1-214ENST00000497055 DBN1Q16643 649 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 SV2AQ7L0J3 742 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 CDC37L1Q7L3B6 337 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 JDP2Q8WYK2 163 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 IRF7Q92985 503 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 CLP1Q92989 425 aaKnown RBP6.39□□□□□ -1.39
SGIP1-214ENST00000497055 ARMC5Q96C12 935 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 GPAMQ9HCL2 828 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 ADARB2Q9NS39 739 aaKnown RBP6.39□□□□□ -1.39
SGIP1-214ENST00000497055 STAP2Q9UGK3 403 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 SLX4Q8IY92 1834 aa6.39□□□□□ -1.39
SGIP1-214ENST00000497055 MUC6Q6W4X9 2439 aa6.38□□□□□ -1.39
SGIP1-214ENST00000497055 CDC14CA4D256 554 aa6.38□□□□□ -1.39
SGIP1-214ENST00000497055 VSIG8P0DPA2 414 aa6.38□□□□□ -1.39
SGIP1-214ENST00000497055 PDE6BP35913 854 aa6.38□□□□□ -1.39
SGIP1-214ENST00000497055 TXLNAP40222 546 aa6.38□□□□□ -1.39
SGIP1-214ENST00000497055 CRKLP46109 303 aaKnown RBP6.38□□□□□ -1.39
SGIP1-214ENST00000497055 LBRQ14739 615 aaKnown RBP6.38□□□□□ -1.39
SGIP1-214ENST00000497055 SH3PXD2AQ5TCZ1 1133 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms