RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 MCM9Q9NXL9 1143 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 SAP30BPQ9UHR5 308 aaKnown RBP18.66■□□□□ 0.58
PHF1-211ENST00000495509 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 E7EWF7 191 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 ZNF280AP59817 542 aaPredicted RBP18.65■□□□□ 0.58
PHF1-211ENST00000495509 NFIAQ12857 509 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 PICALMQ13492 652 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 RBM26Q5T8P6 1007 aaKnown RBP18.65■□□□□ 0.58
PHF1-211ENST00000495509 MICALL2Q8IY33 904 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 GPC2Q8N158 579 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 TBC1D10CQ8IV04 446 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 NKX2-3Q8TAU0 364 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 MYOZ2Q9NPC6 264 aa18.65■□□□□ 0.58
PHF1-211ENST00000495509 FOCADQ5VW36 1801 aa18.64■□□□□ 0.58
PHF1-211ENST00000495509 FLT1P17948 1338 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.57
PHF1-211ENST00000495509 CASTP20810 708 aaKnown RBP18.64■□□□□ 0.57
PHF1-211ENST00000495509 ANP32AP39687 249 aaKnown RBP18.64■□□□□ 0.57
PHF1-211ENST00000495509 PPARAQ07869 468 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 RABEP1Q15276 862 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 NBPF9Q3BBW0 867 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 SAMD7Q7Z3H4 446 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 ZBED3Q96IU2 234 aaPredicted RBP18.64■□□□□ 0.57
PHF1-211ENST00000495509 MYH1P12882 1939 aa18.64■□□□□ 0.57
PHF1-211ENST00000495509 LAMA4Q16363 1823 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 CLRN2A0PK11 232 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 NEK4P51957 841 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 MTMR14Q8NCE2 650 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 ZSWIM6Q9HCJ5 1215 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 WNT10BO00744 389 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 PLCD1P51178 756 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 TBC1D10BQ4KMP7 808 aaPredicted RBP18.63■□□□□ 0.57
PHF1-211ENST00000495509 NEK1Q96PY6 1258 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
PHF1-211ENST00000495509 NAV1Q8NEY1 1877 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 EPS15P42566 896 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 TCP10Q12799 353 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 KRT32Q14532 448 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 SBK1Q52WX2 424 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 C12orf60Q5U649 245 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 TM6SF1Q9BZW5 370 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 GPRC5DQ9NZD1 345 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 ZNF70Q9UC06 446 aaPredicted RBP18.62■□□□□ 0.57
PHF1-211ENST00000495509 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
PHF1-211ENST00000495509 TCEANC2Q96MN5 208 aa18.61■□□□□ 0.57
PHF1-211ENST00000495509 IDI2Q9BXS1 227 aa18.61■□□□□ 0.57
PHF1-211ENST00000495509 ARPP21Q9UBL0 812 aaPredicted RBP18.61■□□□□ 0.57
PHF1-211ENST00000495509 POLR3DP05423 398 aaPredicted RBP18.6■□□□□ 0.57
PHF1-211ENST00000495509 PSMA5P28066 241 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 AKNAD1Q5T1N1 836 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 RUFY3Q7L099 469 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 ASTN2O75129 1339 aaPredicted RBP18.6■□□□□ 0.57
PHF1-211ENST00000495509 NEDD4P46934 1319 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 H7C1D1 291 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 DYNLL2Q96FJ2 89 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 OSBPL5Q9H0X9 879 aaPredicted RBP18.6■□□□□ 0.57
PHF1-211ENST00000495509 SCAF8Q9UPN6 1271 aaKnown RBP18.6■□□□□ 0.57
PHF1-211ENST00000495509 CYP46A1Q9Y6A2 500 aa18.6■□□□□ 0.57
PHF1-211ENST00000495509 TCP10L2B9ZVM9 353 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 MMP14P50281 582 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 SPDYE2Q495Y8 402 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 BLOC1S2Q6QNY1 142 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 MFSD6Q6ZSS7 791 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 TRPM4Q8TD43 1214 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 STAG1Q8WVM7 1258 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 TTC14Q96N46 770 aa18.59■□□□□ 0.57
PHF1-211ENST00000495509 DDX60LQ5H9U9 1706 aaKnown RBP18.59■□□□□ 0.57
PHF1-211ENST00000495509 B4E1Z4 1266 aa18.58■□□□□ 0.57
PHF1-211ENST00000495509 PRDM1O75626 825 aa18.58■□□□□ 0.57
PHF1-211ENST00000495509 DPY19L2Q6NUT2 758 aa18.58■□□□□ 0.57
PHF1-211ENST00000495509 SH3BP5LQ7L8J4 393 aa18.58■□□□□ 0.57
PHF1-211ENST00000495509 LARP6Q9BRS8 491 aaKnown RBP18.58■□□□□ 0.57
PHF1-211ENST00000495509 LRRC2Q9BYS8 371 aa18.58■□□□□ 0.57
PHF1-211ENST00000495509 VEZTQ9HBM0 779 aa18.58■□□□□ 0.57
PHF1-211ENST00000495509 LAMB1P07942 1786 aa18.58■□□□□ 0.56
PHF1-211ENST00000495509 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.56
PHF1-211ENST00000495509 SLURP2P0DP57 97 aa18.58■□□□□ 0.56
PHF1-211ENST00000495509 KIF4BQ2VIQ3 1234 aa18.58■□□□□ 0.56
PHF1-211ENST00000495509 RRP12Q5JTH9 1297 aaKnown RBP18.58■□□□□ 0.56
PHF1-211ENST00000495509 NCOA7Q8NI08 942 aa18.58■□□□□ 0.56
PHF1-211ENST00000495509 TBC1D2Q9BYX2 928 aa18.58■□□□□ 0.56
PHF1-211ENST00000495509 PDRG1Q9NUG6 133 aa18.58■□□□□ 0.56
PHF1-211ENST00000495509 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
PHF1-211ENST00000495509 HIRAP54198 1017 aaPredicted RBP18.57■□□□□ 0.56
PHF1-211ENST00000495509 EXOSC10Q01780 885 aaKnown RBP18.57■□□□□ 0.56
PHF1-211ENST00000495509 CYB5R4Q7L1T6 521 aa18.57■□□□□ 0.56
PHF1-211ENST00000495509 MB21D2Q8IYB1 491 aaPredicted RBP18.57■□□□□ 0.56
PHF1-211ENST00000495509 SLC44A5Q8NCS7 719 aa18.57■□□□□ 0.56
PHF1-211ENST00000495509 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
PHF1-211ENST00000495509 TMOD2Q9NZR1 351 aa18.57■□□□□ 0.56
PHF1-211ENST00000495509 MYO1BO43795 1136 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 FGRP09769 529 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 ANTXR2P58335 489 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 TRDNQ13061 729 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 NOL8Q76FK4 1167 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms